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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16805 and 16806 are separated by 108 nucleotides
16806 and 16807 are separated by 576 nucleotides
16807 and 16808 are separated by 134 nucleotides
16808 and 16809 are separated by 703 nucleotides
mRNA_8437: 16805 - K16948 CDC12 cell division control protein 12, at 1,226,776 to 1,229,088
16805
mRNA_8438: 16806 - K07910 RAB18 Ras-related protein Rab-18, at 1,229,197 to 1,230,748
16806
mRNA_8439: 16807 - KOG4162 Predicted calmodulin-binding protein, at 1,231,325 to 1,234,854
16807
mRNA_8440: 16808 - Hypothetical Protein, at 1,234,989 to 1,235,656
16808
mRNA_8441: 16809 - K09274 K09274 HMG box factor, other, at 1,236,360 to 1,239,302
16809
Group
Condition
mRNA
_8437
mRNA
_8438
mRNA
_8439
mRNA
_8440
mRNA
_8441
16805
16806
16807
16808
16809
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.8
-0.6
-0.3
-1.8
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-2.3
+0.3
-0.9
-0.3
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-1.5
-0.1
-1.3
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.6
-0.4
-0.1
-0.9
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-1.0
-0.1
-0.7
+0.3
growth on oleic acid
YNB Oleic Acid
-0.5
-0.6
+0.2
-0.4
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.5
-0.2
-0.2
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.7
+0.3
+0.3
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.8
+0.2
-0.1
-0.2
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.9
-0.5
+0.4
+0.5
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.8
-0.0
+0.6
-0.3
auxotrophy
Dropout Complete
-0.8
-0.6
+0.1
+0.8
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.5
-0.3
-0.5
-0.3
+0.2
growth on oleic acid
YNB Glucose
-0.2
-0.6
+0.6
-0.2
+0.1
growth on ypd
YPD
+1.5
-0.3
+0.5
-1.9
-0.2
auxotrophy
YNB Glucose
-0.1
-0.9
+0.1
+1.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.5
+0.1
+0.7
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
-0.8
+0.6
+0.5
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
+0.4
-0.2
-0.1
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.4
-0.0
-0.1
+0.3
+0.4
growth on ricinoleic acid
YNB Glucose
-0.1
+0.2
+0.6
+0.8
-0.0
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