Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 16806 and 16807 are separated by 576 nucleotides16807 and 16808 are separated by 134 nucleotides16808 and 16809 are separated by 703 nucleotides16809 and 16810 are separated by 477 nucleotides mRNA_8438: 16806 - K07910 RAB18 Ras-related protein Rab-18, at 1,229,197 to 1,230,748 16806 mRNA_8439: 16807 - KOG4162 Predicted calmodulin-binding protein, at 1,231,325 to 1,234,854 16807 mRNA_8440: 16808 - Hypothetical Protein, at 1,234,989 to 1,235,656 16808 mRNA_8441: 16809 - K09274 K09274 HMG box factor, other, at 1,236,360 to 1,239,302 16809 mRNA_8442: 16810 - K19852 KIN1_2 serine/threonine protein kinase KIN1/2, at 1,239,780 to 1,244,729 16810
Group Condition mRNA_8438 mRNA_8439 mRNA_8440 mRNA_8441 mRNA_8442
16806 16807 16808 16809 16810
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.5 -0.1 -1.3 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 -0.3 -1.8 -0.1 +0.2
growth on ypd YPD -0.3 +0.5 -1.9 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.0 -0.1 -0.7 +0.3 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.1 -0.9 +0.2 +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.5 -0.2 -0.2 -0.2 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.9 -0.3 -0.2 +0.2
growth on oleic acid YNB Oleic Acid -0.6 +0.2 -0.4 -0.0 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.4 -0.2 -0.1 +0.1 -0.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.5 -0.3 +0.2 +0.4
auxotrophy YNB Glucose 75mM Arginine -0.8 -0.0 +0.6 -0.3 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.7 +0.3 +0.3 -0.2 +0.0
growth on oleic acid YNB Glucose -0.6 +0.6 -0.2 +0.1 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.1 -0.2 +0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.5 +0.1 +0.7 -0.2 +0.1
auxotrophy YNB Glucose -0.9 +0.1 +1.0 -0.1 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8 +0.6 +0.5 -0.3 +0.4
auxotrophy Dropout Complete -0.6 +0.1 +0.8 +0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 +0.4 +0.5 -0.1 +0.3
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.1 +0.3 +0.4 +0.1
growth on ricinoleic acid YNB Glucose +0.2 +0.6 +0.8 -0.0 +0.2
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