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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16807 and 16808 are separated by 134 nucleotides
16808 and 16809 are separated by 703 nucleotides
16809 and 16810 are separated by 477 nucleotides
16810 and 16811 are separated by 230 nucleotides
mRNA_8439: 16807 - KOG4162 Predicted calmodulin-binding protein, at 1,231,325 to 1,234,854
16807
mRNA_8440: 16808 - Hypothetical Protein, at 1,234,989 to 1,235,656
16808
mRNA_8441: 16809 - K09274 K09274 HMG box factor, other, at 1,236,360 to 1,239,302
16809
mRNA_8442: 16810 - K19852 KIN1_2 serine/threonine protein kinase KIN1/2, at 1,239,780 to 1,244,729
16810
mRNA_8443: 16811 - Hypothetical Protein, at 1,244,960 to 1,245,436
16811
Group
Condition
mRNA
_8439
mRNA
_8440
mRNA
_8441
mRNA
_8442
mRNA
_8443
16807
16808
16809
16810
16811
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-1.8
-0.1
+0.2
+0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.9
-0.3
-0.2
+0.2
-0.3
growth on ypd
YPD
+0.5
-1.9
-0.2
-0.2
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-1.3
+0.2
-0.1
+0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.9
+0.2
+0.0
+0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.7
+0.3
+0.1
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.1
+0.1
-0.7
+0.7
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.2
-0.2
+0.1
+0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
-0.3
+0.2
+0.4
+0.2
growth on oleic acid
YNB Oleic Acid
+0.2
-0.4
-0.0
+0.1
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.2
+0.1
-0.1
+0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.0
+0.6
-0.3
+0.1
+0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.3
+0.3
-0.2
+0.0
+0.4
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.3
+0.4
+0.1
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.7
-0.2
+0.1
+0.3
growth on oleic acid
YNB Glucose
+0.6
-0.2
+0.1
+0.0
+0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
+0.5
-0.1
+0.3
+0.5
auxotrophy
YNB Glucose
+0.1
+1.0
-0.1
+0.2
+0.4
auxotrophy
Dropout Complete
+0.1
+0.8
+0.1
+0.1
+0.4
growth on ricinoleic acid
YNB Glucose
+0.6
+0.8
-0.0
+0.2
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.6
+0.5
-0.3
+0.4
+0.4
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