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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16810 and 16811 are separated by 230 nucleotides
16811 and 16812 are separated by 219 nucleotides
16812 and 16813 are separated by 907 nucleotides
16813 and 16814 are separated by 253 nucleotides
mRNA_8442: 16810 - K19852 KIN1_2 serine/threonine protein kinase KIN1/2, at 1,239,780 to 1,244,729
16810
mRNA_8443: 16811 - Hypothetical Protein, at 1,244,960 to 1,245,436
16811
mRNA_8444: 16812 - HMMPfam-HPP family-PF04982, at 1,245,656 to 1,246,720
16812
mRNA_8445: 16813 - KOG0691 Molecular chaperone (DnaJ superfamily), at 1,247,628 to 1,249,851
16813
mRNA_8446: 16814 - K01115 PLD1_2 phospholipase D1/2, at 1,250,105 to 1,254,255
16814
Group
Condition
mRNA
_8442
mRNA
_8443
mRNA
_8444
mRNA
_8445
mRNA
_8446
16810
16811
16812
16813
16814
facs on lipid accumulation
Sorted High BODIPY Gate
-0.7
+0.7
-0.8
-0.9
-0.4
auxotrophy
YNB Glucose
+0.2
+0.4
-1.1
-0.3
-0.2
auxotrophy
Dropout Complete
+0.1
+0.4
-1.2
-0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.0
-0.8
-0.2
-0.0
growth on ricinoleic acid
YNB Glucose
+0.2
+0.0
-0.5
-0.2
-0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.0
+0.4
-1.0
-0.1
+0.1
growth on ypd
YPD
-0.2
+0.4
-0.1
-0.2
-0.2
growth on oleic acid
YNB Glucose
+0.0
+0.5
-0.2
-0.3
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+0.5
-0.6
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.2
-0.1
+0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
+0.5
+0.0
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.5
-0.2
-0.2
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
+0.4
-0.4
-0.2
+0.0
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.1
+0.3
-0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.3
+0.1
-0.0
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
-0.3
+0.5
-0.2
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
+0.5
-0.0
-0.1
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
+0.2
-0.0
-0.1
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.4
+0.1
-0.0
+0.0
growth on oleic acid
YNB Oleic Acid
+0.1
+0.4
+0.1
-0.0
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
+0.4
-0.1
+0.0
+0.2
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