Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16813 and 16814 are separated by 253 nucleotides16814 and 16815 are separated by 550 nucleotides16815 and 16816 are separated by 1058 nucleotides16816 and 16817 are separated by 160 nucleotides mRNA_8445: 16813 - KOG0691 Molecular chaperone (DnaJ superfamily), at 1,247,628 to 1,249,851 16813 mRNA_8446: 16814 - K01115 PLD1_2 phospholipase D1/2, at 1,250,105 to 1,254,255 16814 mRNA_8447: 16815 - K15429 TRM5, TRMT5 tRNA (guanine37-N1)-methyltransferase, at 1,254,806 to 1,256,692 16815 mRNA_8448: 16816 - HMMPfam-Protein of unknown function (DUF962)-PF06127, at 1,257,751 to 1,258,571 16816 mRNA_8449: 16817 - KOG0198 MEKK and related serine/threonine protein kinases, at 1,258,732 to 1,261,080 16817
Group Condition mRNA_8445 mRNA_8446 mRNA_8447 mRNA_8448 mRNA_8449
16813 16814 16815 16816 16817
facs on lipid accumulation Sorted High BODIPY Gate -0.9 -0.4 N.D. -0.2 +0.2
auxotrophy YNB Glucose -0.3 -0.2 N.D. -0.0 -0.4
growth on oleic acid YNB Glucose -0.3 -0.2 N.D. -0.1 -0.1
growth on oleic acid YNB Oleic Acid -0.0 +0.0 N.D. -0.2 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.0 N.D. +0.2 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.1 N.D. +0.0 -0.2
auxotrophy Dropout Complete -0.2 -0.1 N.D. +0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.0 N.D. +0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.1 N.D. -0.0 -0.2
growth on ypd YPD -0.2 -0.2 N.D. +0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.1 N.D. +0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.0 N.D. +0.0 -0.1
growth on ricinoleic acid YNB Glucose -0.2 -0.2 N.D. +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.0 N.D. +0.0 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.0 N.D. +0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.2 N.D. +0.1 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.2 N.D. -0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.0 N.D. +0.2 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +0.3 N.D. -0.1 +0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.1 N.D. +0.2 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.1 N.D. +0.1 +0.3
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