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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16818 and 16819 are separated by 139 nucleotides
16819 and 16820 are separated by 2390 nucleotides
16820 and 16821 are separated by 800 nucleotides
16821 and 16822 are separated by 818 nucleotides
mRNA_8450: 16818 - K06670 SCC1, MCD1, RAD21 cohesin complex subunit SCC1, at 1,264,396 to 1,266,785
16818
mRNA_8451: 16819 - Hypothetical Protein, at 1,266,925 to 1,267,155
16819
mRNA_8452: 16820 - Hypothetical Protein, at 1,269,546 to 1,270,646
16820
mRNA_8453: 16821 - Hypothetical Protein, at 1,271,447 to 1,272,536
16821
mRNA_8454: 16822 - Hypothetical Protein, at 1,273,355 to 1,274,280
16822
Group
Condition
mRNA
_8450
mRNA
_8451
mRNA
_8452
mRNA
_8453
mRNA
_8454
16818
16819
16820
16821
16822
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
-0.5
-0.8
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
-0.4
-0.8
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
-0.3
-0.3
-0.6
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
-0.2
-0.9
+0.3
auxotrophy
YNB Glucose
N.D.
N.D.
-0.4
+0.2
-0.5
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
-0.2
-0.3
-0.1
auxotrophy
Dropout Complete
N.D.
N.D.
-0.3
+0.3
-0.2
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
+0.1
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
-0.3
+0.3
-0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
-0.0
-0.0
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
-0.3
+0.1
+0.1
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
-0.2
+0.2
-0.0
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
-0.4
+0.4
+0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
+0.1
-0.1
+0.3
growth on oleic acid
YNB Glucose
N.D.
N.D.
-0.1
+0.5
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
-0.2
+0.3
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
+0.2
+0.2
-0.1
growth on ypd
YPD
N.D.
N.D.
-0.2
+0.4
+0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
-0.1
+0.9
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
-0.5
+1.0
+0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
-0.3
+1.5
+0.1
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