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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16821 and 16822 are separated by 818 nucleotides
16822 and 16823 are separated by 679 nucleotides
16823 and 16824 are separated by 123 nucleotides
16824 and 16825 are separated by 1162 nucleotides
mRNA_8453: 16821 - Hypothetical Protein, at 1,271,447 to 1,272,536
16821
mRNA_8454: 16822 - Hypothetical Protein, at 1,273,355 to 1,274,280
16822
mRNA_8455: 16823 - K06013 STE24 STE24 endopeptidase, at 1,274,960 to 1,276,666
16823
mRNA_8456: 16824 - Hypothetical Protein, at 1,276,790 to 1,279,771
16824
mRNA_8457: 16825 - K02728 PSMA4 20S proteasome subunit alpha 3, at 1,280,934 to 1,282,715
16825
Group
Condition
mRNA
_8453
mRNA
_8454
mRNA
_8455
mRNA
_8456
mRNA
_8457
16821
16822
16823
16824
16825
facs on lipid accumulation
Sorted High BODIPY Gate
-0.8
-0.1
+0.0
+0.0
-4.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.8
-0.0
+0.1
-0.1
-3.6
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.6
+0.0
+0.1
-2.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-0.1
-0.0
-0.1
-2.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.1
+0.2
-0.2
-2.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.9
-0.1
+0.4
-0.2
-2.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
+0.2
+0.7
-0.2
-1.8
ypd buoyancy
40 hrs No Buoyancy Separation
-0.9
+0.3
+0.2
-0.2
-0.2
growth on ricinoleic acid
YNB Glucose
-0.1
-0.2
+0.2
-0.2
-0.4
growth on oleic acid
YNB Oleic Acid
+0.2
-0.0
+0.1
-0.1
-0.7
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.1
-0.2
-0.0
+0.4
auxotrophy
YNB Glucose
+0.2
-0.5
-0.0
-0.2
+0.3
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.1
-0.1
-0.1
+0.2
growth on oleic acid
YNB Glucose
+0.5
-0.2
+0.0
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+1.0
+0.6
+0.4
-0.2
-1.8
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+1.5
+0.1
+0.2
-0.3
-1.3
growth on ypd
YPD
+0.4
+0.5
-0.0
+0.0
-0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.3
-0.2
+0.1
-0.3
+0.8
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.3
-0.2
+0.0
+0.9
auxotrophy
Dropout Complete
+0.3
-0.2
+0.1
-0.2
+1.0
auxotrophy
YNB Glucose 75mM Methionine
+0.4
+0.0
+0.1
-0.1
+0.5
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