Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16823 and 16824 are separated by 123 nucleotides16824 and 16825 are separated by 1162 nucleotides16825 and 16826 are separated by 893 nucleotides16826 and 16827 are separated by 300 nucleotides mRNA_8455: 16823 - K06013 STE24 STE24 endopeptidase, at 1,274,960 to 1,276,666 16823 mRNA_8456: 16824 - Hypothetical Protein, at 1,276,790 to 1,279,771 16824 mRNA_8457: 16825 - K02728 PSMA4 20S proteasome subunit alpha 3, at 1,280,934 to 1,282,715 16825 mRNA_8458: 16826 - Hypothetical Protein, at 1,283,609 to 1,284,091 16826 mRNA_8459: 16827 - SUPERFAMILY--SSF50685, at 1,284,392 to 1,285,740 16827
Group Condition mRNA_8455 mRNA_8456 mRNA_8457 mRNA_8458 mRNA_8459
16823 16824 16825 16826 16827
facs on lipid accumulation Sorted High BODIPY Gate +0.0 +0.0 -4.4 +0.6 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.1 -3.6 +0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 +0.1 -2.0 +0.2 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.1 -2.3 +0.2 +0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 -0.2 -2.5 +0.3 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 -0.2 -1.8 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.3 -1.3 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.7 -0.2 -1.8 -0.2 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.2 -2.3 +0.3 +1.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.2 -0.2 -0.3 -0.1
growth on oleic acid YNB Glucose +0.0 -0.2 -0.1 -0.1 +0.0
growth on oleic acid YNB Oleic Acid +0.1 -0.1 -0.7 +0.1 +0.5
growth on ricinoleic acid YNB Glucose +0.2 -0.2 -0.4 +0.1 +0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 +0.2 -0.5 +0.5
growth on ypd YPD -0.0 +0.0 -0.0 +0.4 -0.1
auxotrophy YNB Glucose -0.0 -0.2 +0.3 +0.1 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.0 +0.4 -0.0 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.1 +0.5 -0.0 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.0 +0.9 -0.2 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.3 +0.8 +0.0 -0.1
auxotrophy Dropout Complete +0.1 -0.2 +1.0 +0.1 +0.3
remove
mRNA_8455
plot
remove
mRNA_8456
plot
remove
mRNA_8457
remove
mRNA_8458
plot
remove
mRNA_8459
plot