Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16825 and 16826 are separated by 893 nucleotides16826 and 16827 are separated by 300 nucleotides16827 and 16828 are separated by 1515 nucleotides16828 and 16829 are separated by 305 nucleotides mRNA_8457: 16825 - K02728 PSMA4 20S proteasome subunit alpha 3, at 1,280,934 to 1,282,715 16825 mRNA_8458: 16826 - Hypothetical Protein, at 1,283,609 to 1,284,091 16826 mRNA_8459: 16827 - SUPERFAMILY--SSF50685, at 1,284,392 to 1,285,740 16827 mRNA_8460: 16828 - KOG0527 HMG-box transcription factor, at 1,287,256 to 1,290,060 16828 mRNA_8461: 16829 - BLAST Copper radical oxidase [Trametes cinnabarina], at 1,290,366 to 1,291,802 16829
Group Condition mRNA_8457 mRNA_8458 mRNA_8459 mRNA_8460 mRNA_8461
16825 16826 16827 16828 16829
facs on lipid accumulation Sorted High BODIPY Gate -4.4 +0.6 -0.2 +0.1 +0.4
facs on lipid accumulation Sorted No BODIPY Gate -3.6 +0.1 -0.3 +0.2 +0.5
facs on lipid accumulation Sorted Low BODIPY Gate -2.0 +0.2 -0.6 +0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -2.5 +0.3 +0.5 -0.0 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.8 -0.2 +0.3 +0.2 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.8 +0.1 +0.1 +0.0 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.3 +0.0 +0.1 -0.1 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -2.3 +0.3 +1.0 +0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -2.3 +0.2 +0.7 +0.4 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.3 -0.1 +0.4 -0.2
growth on oleic acid YNB Glucose -0.1 -0.1 +0.0 -0.3 +0.0
growth on oleic acid YNB Oleic Acid -0.7 +0.1 +0.5 -0.1 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.5 +0.5 -0.0 -0.2
growth on ricinoleic acid YNB Glucose -0.4 +0.1 +0.3 +0.3 -0.1
growth on ypd YPD -0.0 +0.4 -0.1 -0.1 +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.4 -0.0 +0.3 +0.1 +0.0
auxotrophy YNB Glucose +0.3 +0.1 +0.2 +0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.5 -0.0 -0.0 +0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.8 +0.0 -0.1 +0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.9 -0.2 +0.1 +0.2 -0.1
auxotrophy Dropout Complete +1.0 +0.1 +0.3 +0.2 +0.0
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