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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
16826 and 16827 are separated by 300 nucleotides
16827 and 16828 are separated by 1515 nucleotides
16828 and 16829 are separated by 305 nucleotides
16829 and 16830 are separated by 403 nucleotides
mRNA_8458: 16826 - Hypothetical Protein, at 1,283,609 to 1,284,091
16826
mRNA_8459: 16827 - SUPERFAMILY--SSF50685, at 1,284,392 to 1,285,740
16827
mRNA_8460: 16828 - KOG0527 HMG-box transcription factor, at 1,287,256 to 1,290,060
16828
mRNA_8461: 16829 - BLAST Copper radical oxidase [Trametes cinnabarina], at 1,290,366 to 1,291,802
16829
mRNA_8462: 16830 - Hypothetical Protein, at 1,292,206 to 1,292,868
16830
Group
Condition
mRNA
_8458
mRNA
_8459
mRNA
_8460
mRNA
_8461
mRNA
_8462
16826
16827
16828
16829
16830
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.6
+0.0
-0.1
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.1
+0.4
-0.2
-0.3
growth on oleic acid
YNB Glucose
-0.1
+0.0
-0.3
+0.0
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-0.1
+0.1
-0.1
+0.0
ypd buoyancy
40 hrs High Buoyancy
-0.5
+0.5
-0.0
-0.2
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.3
+0.2
+0.5
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.2
+0.1
+0.2
-0.1
+0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.0
+0.1
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
+0.1
-0.1
+0.3
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
+0.3
+0.2
+0.2
-0.2
growth on ricinoleic acid
YNB Glucose
+0.1
+0.3
+0.3
-0.1
-0.1
auxotrophy
YNB Glucose
+0.1
+0.2
+0.2
-0.1
+0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.0
+0.3
+0.1
+0.0
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.1
+0.0
+0.5
-0.1
growth on oleic acid
YNB Oleic Acid
+0.1
+0.5
-0.1
+0.2
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
+0.5
-0.0
+0.0
-0.1
auxotrophy
Dropout Complete
+0.1
+0.3
+0.2
+0.0
+0.2
growth on ypd
YPD
+0.4
-0.1
-0.1
+0.4
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.6
-0.2
+0.1
+0.4
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
+1.0
+0.2
-0.1
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
+0.7
+0.4
+0.2
+0.3
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