Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16834 and 16835 are separated by 257 nucleotides16835 and 16836 are separated by 313 nucleotides16836 and 16837 are separated by 197 nucleotides16837 and 16838 are separated by 169 nucleotides mRNA_8466: 16834 - KOG2112 Lysophospholipase, at 1,302,209 to 1,303,351 16834 mRNA_8467: 16835 - Hypothetical Protein, at 1,303,609 to 1,304,454 16835 mRNA_8468: 16836 - K00131 gapN glyceraldehyde-3-phosphate dehydrogenase (NADP+), at 1,304,768 to 1,306,783 16836 mRNA_8469: 16837 - K14654 RIB7, arfC 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase, at 1,306,981 to 1,308,021 16837 mRNA_8470: 16838 - Hypothetical Protein, at 1,308,191 to 1,308,727 16838
Group Condition mRNA_8466 mRNA_8467 mRNA_8468 mRNA_8469 mRNA_8470
16834 16835 16836 16837 16838
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -2.7 -0.4 N.D. -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 +0.7 -0.1 N.D. -2.5
growth on ypd YPD +0.3 +0.1 +0.1 N.D. -1.7
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.1 -0.2 N.D. -0.7
growth on oleic acid YNB Glucose +0.0 +0.3 -0.2 N.D. -1.0
growth on oleic acid YNB Oleic Acid +0.0 +0.2 -0.3 N.D. -0.7
ypd buoyancy 40 hrs Median Buoyancy -0.4 -0.4 +0.1 N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.2 +0.2 N.D. -0.6
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.2 -0.0 N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 +0.9 -0.1 N.D. -1.6
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.2 -0.1 N.D. -0.6
facs on lipid accumulation Sorted No BODIPY Gate +0.4 +0.9 -0.1 N.D. -1.1
growth on ricinoleic acid YNB Glucose +0.4 -0.0 +0.1 N.D. -0.4
auxotrophy Dropout Complete -0.1 +0.6 -0.3 N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.3 -0.2 N.D. +0.1
auxotrophy YNB Glucose +0.3 +0.1 -0.2 N.D. +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +1.3 +0.3 N.D. -1.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +0.9 +0.1 N.D. -0.5
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.6 -0.3 N.D. +0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +1.1 +0.1 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 +1.1 -0.2 N.D. +0.3
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