Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16840 and 16841 are separated by 127 nucleotides16841 and 16842 are separated by 909 nucleotides16842 and 16843 are separated by 480 nucleotides16843 and 16844 are separated by 891 nucleotides mRNA_8472: 16840 - KOG1769 Ubiquitin-like proteins, at 1,310,090 to 1,310,770 16840 mRNA_8473: 16841 - HMMPfam-Endonuclease/Exonuclease/phosphatase family-PF03372,SUPERFAMILY--SSF56219, at 1,310,898 to 1,312,321 16841 mRNA_8474: 16842 - Hypothetical Protein, at 1,313,231 to 1,316,089 16842 mRNA_8475: 16843 - K03113 EIF1, SUI1 translation initiation factor 1, at 1,316,570 to 1,317,509 16843 mRNA_8476: 16844 - BLAST glycoside hydrolase family 43 protein [Mycena chlorop..., at 1,318,401 to 1,318,799 16844
Group Condition mRNA_8472 mRNA_8473 mRNA_8474 mRNA_8475 mRNA_8476
16840 16841 16842 16843 16844
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -0.7 -0.4 N.D. -1.1
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.1 -0.1 N.D. -0.6
ypd buoyancy 40 hrs Median Buoyancy -0.5 +0.0 -0.2 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.3 -0.0 N.D. -0.1
growth on ypd YPD -0.2 +0.2 +0.1 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.3 -0.0 N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.1 -0.1 N.D. +0.2
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.1 +0.0 N.D. +0.2
growth on oleic acid YNB Glucose -0.1 +0.3 +0.0 N.D. +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.1 -0.0 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.4 +0.3 N.D. -0.4
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.0 +0.1 N.D. +0.8
auxotrophy YNB Glucose +0.0 -0.2 +0.1 N.D. +0.7
auxotrophy Dropout Complete -0.1 -0.0 +0.4 N.D. +0.5
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 +0.1 -0.1 N.D. +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.1 +0.0 N.D. +0.7
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.1 +0.2 N.D. +0.8
growth on oleic acid YNB Oleic Acid +0.1 +0.1 +0.4 N.D. +0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.5 +0.0 +0.2 N.D. +0.4
growth on ricinoleic acid YNB Glucose +0.4 -0.1 +0.4 N.D. +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.0 +0.3 N.D. +0.7
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