Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
16841 and 16842 are separated by 909 nucleotides
16842 and 16843 are separated by 480 nucleotides
16843 and 16844 are separated by 891 nucleotides
16844 and 16845 are separated by 263 nucleotides
mRNA_8473: 16841 - HMMPfam-Endonuclease/Exonuclease/phosphatase family-PF03372,SUPERFAMILY--SSF56219, at 1,310,898 to 1,312,321
16841
mRNA_8474: 16842 - Hypothetical Protein, at 1,313,231 to 1,316,089
16842
mRNA_8475: 16843 - K03113 EIF1, SUI1 translation initiation factor 1, at 1,316,570 to 1,317,509
16843
mRNA_8476: 16844 - BLAST glycoside hydrolase family 43 protein [Mycena chlorop..., at 1,318,401 to 1,318,799
16844
mRNA_8477: 16845 - KOG4405 GDP dissociation inhibitor, at 1,319,063 to 1,321,156
16845
Group
Condition
mRNA
_8473
mRNA
_8474
mRNA
_8475
mRNA
_8476
mRNA
_8477
16841
16842
16843
16844
16845
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
-0.4
N.D.
-1.1
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.1
N.D.
-0.6
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.2
N.D.
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.0
N.D.
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
-0.0
N.D.
-0.2
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.3
-0.0
N.D.
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-0.1
N.D.
+0.2
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
+0.3
N.D.
-0.4
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-0.1
N.D.
+0.2
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.0
N.D.
+0.2
N.D.
growth on ypd
YPD
+0.2
+0.1
N.D.
+0.2
N.D.
growth on oleic acid
YNB Glucose
+0.3
+0.0
N.D.
+0.2
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
+0.2
N.D.
+0.4
N.D.
auxotrophy
YNB Glucose
-0.2
+0.1
N.D.
+0.7
N.D.
auxotrophy
Dropout Complete
-0.0
+0.4
N.D.
+0.5
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.0
+0.1
N.D.
+0.8
N.D.
growth on ricinoleic acid
YNB Glucose
-0.1
+0.4
N.D.
+0.5
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.0
N.D.
+0.7
N.D.
growth on oleic acid
YNB Oleic Acid
+0.1
+0.4
N.D.
+0.4
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
+0.2
N.D.
+0.8
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
+0.3
N.D.
+0.7
N.D.
remove
mRNA_8473
plot
remove
mRNA_8474
plot
remove
mRNA_8475
remove
mRNA_8476
plot
remove
mRNA_8477
plot