Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16843 and 16844 are separated by 891 nucleotides16844 and 16845 are separated by 263 nucleotides16845 and 16846 are separated by 368 nucleotides16846 and 16847 are separated by 109 nucleotides mRNA_8475: 16843 - K03113 EIF1, SUI1 translation initiation factor 1, at 1,316,570 to 1,317,509 16843 mRNA_8476: 16844 - BLAST glycoside hydrolase family 43 protein [Mycena chlorop..., at 1,318,401 to 1,318,799 16844 mRNA_8477: 16845 - KOG4405 GDP dissociation inhibitor, at 1,319,063 to 1,321,156 16845 mRNA_8478: 16846 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 1,321,525 to 1,322,743 16846 mRNA_8479: 16847 - Hypothetical Protein, at 1,322,853 to 1,323,925 16847
Group Condition mRNA_8475 mRNA_8476 mRNA_8477 mRNA_8478 mRNA_8479
16843 16844 16845 16846 16847
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -1.1 N.D. -0.0 -1.3
ypd buoyancy 40 hrs High Buoyancy N.D. -0.6 N.D. -0.2 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.4 N.D. -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.2 N.D. +0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 N.D. -0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 N.D. -0.2 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.2 N.D. -0.2 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 N.D. +0.0 +0.0
growth on ypd YPD N.D. +0.2 N.D. -0.2 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.1 N.D. +0.1 +0.2
auxotrophy Dropout Complete N.D. +0.5 N.D. -0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 N.D. +0.2 +0.1
auxotrophy YNB Glucose N.D. +0.7 N.D. -0.2 +0.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.4 N.D. +0.0 +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. +0.8 N.D. +0.1 -0.1
growth on ricinoleic acid YNB Glucose N.D. +0.5 N.D. -0.0 +0.3
growth on oleic acid YNB Glucose N.D. +0.2 N.D. +0.2 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.7 N.D. -0.1 +0.6
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.8 N.D. +0.1 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.7 N.D. +0.1 +0.7
growth on oleic acid YNB Oleic Acid N.D. +0.4 N.D. +0.6 +0.8
remove
mRNA_8475
plot
remove
mRNA_8476
plot
remove
mRNA_8477
remove
mRNA_8478
plot
remove
mRNA_8479
plot