Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 16850 and 16851 are separated by 700 nucleotides16851 and 16852 are separated by 222 nucleotides16852 and 16853 are separated by 223 nucleotides16853 and 16854 are separated by 158 nucleotides mRNA_8482: 16850 - K00854 xylB, XYLB xylulokinase, at 1,328,574 to 1,331,754 16850 mRNA_8483: 16851 - BLAST GA28568 gene product from transcript GA28568-RA [Rhiz..., at 1,332,455 to 1,336,946 16851 mRNA_8484: 16852 - KOG0725 Reductases with broad range of substrate specificities, at 1,337,169 to 1,338,536 16852 mRNA_8485: 16853 - K12946 SPCS1 signal peptidase complex subunit 1, at 1,338,760 to 1,339,317 16853 mRNA_8486: 16854 - KOG1162 Predicted small molecule transporter, at 1,339,476 to 1,341,474 16854
Group Condition mRNA_8482 mRNA_8483 mRNA_8484 mRNA_8485 mRNA_8486
16850 16851 16852 16853 16854
auxotrophy YNB Glucose -0.1 -0.0 -0.2 -0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.0 -0.0 +0.1 -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.1 -0.3 +0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.3 -0.2 -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.0 -0.2 +0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.0 -0.1 +0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.3 -0.0 +0.3 N.D.
growth on ypd YPD -0.0 -0.1 +0.0 +0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.1 +0.2 -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.0 +0.1 +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.0 +0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.2 +0.4 -0.5 N.D.
auxotrophy Dropout Complete +0.0 +0.1 +0.1 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.2 +0.4 -0.5 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.0 +0.1 +0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.0 +0.2 +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.1 -0.0 +0.6 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.2 +0.4 -0.3 N.D.
growth on oleic acid YNB Oleic Acid +0.0 +0.1 +0.3 +0.2 N.D.
growth on oleic acid YNB Glucose -0.0 +0.1 +0.3 +0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.1 +0.1 +0.4 N.D.
remove
mRNA_8482
plot
remove
mRNA_8483
plot
remove
mRNA_8484
remove
mRNA_8485
plot
remove
mRNA_8486
plot