Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 16853 and 16854 are separated by 158 nucleotides16854 and 16855 are separated by 1419 nucleotides16855 and 16856 are separated by 328 nucleotides16856 and 16857 are separated by 221 nucleotides mRNA_8485: 16853 - K12946 SPCS1 signal peptidase complex subunit 1, at 1,338,760 to 1,339,317 16853 mRNA_8486: 16854 - KOG1162 Predicted small molecule transporter, at 1,339,476 to 1,341,474 16854 mRNA_8487: 16855 - Hypothetical Protein, at 1,342,894 to 1,343,446 16855 mRNA_8488: 16856 - K03135 TAF11 transcription initiation factor TFIID subunit 11, at 1,343,775 to 1,344,763 16856 mRNA_8489: 16857 - K17768 TOM70 mitochondrial import receptor subunit TOM70, at 1,344,985 to 1,347,590 16857
Group Condition mRNA_8485 mRNA_8486 mRNA_8487 mRNA_8488 mRNA_8489
16853 16854 16855 16856 16857
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 N.D. N.D. N.D. -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 N.D. N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 N.D. N.D. N.D. +0.0
growth on ricinoleic acid YNB Glucose -0.2 N.D. N.D. N.D. -0.2
auxotrophy YNB Glucose -0.1 N.D. N.D. N.D. -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. N.D. N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine +0.0 N.D. N.D. N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. N.D. N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. N.D. N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. N.D. N.D. -0.0
auxotrophy Dropout Complete +0.2 N.D. N.D. N.D. -0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. N.D. N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine +0.4 N.D. N.D. N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. N.D. N.D. +0.1
growth on oleic acid YNB Oleic Acid +0.2 N.D. N.D. N.D. +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 N.D. N.D. N.D. -0.2
growth on oleic acid YNB Glucose +0.3 N.D. N.D. N.D. +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 N.D. N.D. N.D. +0.4
growth on ypd YPD +0.2 N.D. N.D. N.D. +0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 N.D. N.D. N.D. +0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. N.D. N.D. +0.8
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