Fitness for 3 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 16856 and 16857 are separated by 221 nucleotides16857 and 16858 are separated by 606 nucleotides mRNA_8488: 16856 - K03135 TAF11 transcription initiation factor TFIID subunit 11, at 1,343,775 to 1,344,763 16856 mRNA_8489: 16857 - K17768 TOM70 mitochondrial import receptor subunit TOM70, at 1,344,985 to 1,347,590 16857 mRNA_8490: 16858 - ProSitePatterns-Zinc finger PHD-type signature.-PS01359,ProSiteProfiles-Zinc finger PHD-type profile.-PS50016,SMART-PHD zinc finger-SM00249,SUPERFAMILY--SSF57903, at 1,348,197 to 1,351,879 16858
Group Condition mRNA_8488 mRNA_8489 mRNA_8490
16856 16857 16858
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.4 -0.7
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 -0.2
growth on ricinoleic acid YNB Glucose N.D. -0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.2 -0.1
auxotrophy YNB Glucose N.D. -0.4 +0.3
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.1 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.1 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.0 +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 +0.4
auxotrophy YNB Glucose 75mM Arginine N.D. -0.1 +0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.0 +0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.2 +0.2
auxotrophy Dropout Complete N.D. -0.0 +0.5
growth on ypd YPD N.D. +0.3 +0.3
growth on oleic acid YNB Glucose N.D. +0.1 +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.8 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.4 +0.8
growth on oleic acid YNB Oleic Acid N.D. +0.2 +1.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.8 +1.4
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