Fitness for 3 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 8369 and 8370 are separated by 779 nucleotides8370 and 8371 are separated by 345 nucleotides mRNA_1: 8369 - K12198 CHMP5, VPS60 charged multivesicular body protein 5, at 1,571 to 2,453 8369 mRNA_2: 8370 - PRINTS-Proline rich extensin signature-PR01217, at 3,233 to 7,809 8370 mRNA_3: 8371 - K15161 CCNC, SSN8 cyclin C, at 8,155 to 10,023 8371
Group Condition mRNA_1 mRNA_2 mRNA_3
8369 8370 8371
facs on lipid accumulation Sorted No BODIPY Gate -3.1 -1.4 -1.0
facs on lipid accumulation Sorted Low BODIPY Gate -1.8 -2.3 -0.9
facs on lipid accumulation Sorted High BODIPY Gate -2.1 -1.2 -0.8
auxotrophy YNB Glucose 75mM Arginine -2.1 -1.2 -0.2
auxotrophy YNB Glucose -0.8 -1.8 +0.0
auxotrophy Dropout Complete -1.2 -1.5 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.5 -1.3 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -2.3 +0.7 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -1.5 -0.3
growth on oleic acid YNB Glucose -0.7 -0.7 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -1.4 +0.5
growth on ypd YPD -0.4 -0.3 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 -0.4 -0.6
growth on ricinoleic acid YNB Glucose -0.6 +0.2 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.7 +0.7 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.3 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.8 -0.9 +0.8
growth on oleic acid YNB Oleic Acid +0.5 -0.1 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.5 +1.5 -0.3
ypd buoyancy 40 hrs Median Buoyancy -1.0 +1.9 +0.0
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