Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8371 and 8372 are separated by 201 nucleotides8372 and 8373 are separated by 207 nucleotides8373 and 8374 are separated by 166 nucleotides8374 and 8375 are separated by 952 nucleotides mRNA_3: 8371 - K15161 CCNC, SSN8 cyclin C, at 8,155 to 10,023 8371 mRNA_4: 8372 - K00772 mtaP, MTAP 5'-methylthioadenosine phosphorylase, at 10,225 to 11,839 8372 mRNA_5: 8373 - SUPERFAMILY--SSF51695, at 12,047 to 13,694 8373 mRNA_6: 8374 - SUPERFAMILY--SSF47676, at 13,861 to 19,221 8374 mRNA_7: 8375 - HMMPfam-LIM-domain binding protein-PF01803,PRINTS-Proline rich extensin signature-PR01217, at 20,174 to 22,955 8375
Group Condition mRNA_3 mRNA_4 mRNA_5 mRNA_6 mRNA_7
8371 8372 8373 8374 8375
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 -1.8 +0.2 -0.0 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 -1.9 +0.4 +0.3 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.9 -0.3 +0.1 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.6 +0.1 +0.1 -1.1
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.4 +0.1 -0.4 -0.6
facs on lipid accumulation Sorted No BODIPY Gate -1.0 -0.2 -0.1 -0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.8 +0.1 +0.1 +0.0 -0.8
auxotrophy Dropout Complete +0.1 -0.6 -0.2 -0.2 -0.5
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.6 +0.2 -0.3 -0.4
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.7 -0.4 +0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.3 +0.0 -0.0 +0.1
growth on oleic acid YNB Oleic Acid +0.2 -0.5 +0.3 -0.1 -0.4
growth on ypd YPD -0.2 -0.7 +0.4 -0.2 +0.3
auxotrophy YNB Glucose +0.0 +0.2 +0.3 -0.3 -0.5
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.1 -0.3 +0.2 -0.0
growth on oleic acid YNB Glucose -0.0 +0.1 +0.0 -0.0 -0.2
growth on ricinoleic acid YNB Glucose +0.0 +0.2 -0.0 +0.1 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.3 +0.3 +0.3 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.8 -0.6 +0.2 +0.5 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.3 +0.1 +0.2 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 -0.2 +0.3 +0.1 +0.0
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