Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8373 and 8374 are separated by 166 nucleotides8374 and 8375 are separated by 952 nucleotides8375 and 8376 are separated by 222 nucleotides8376 and 8377 are separated by 1976 nucleotides mRNA_5: 8373 - SUPERFAMILY--SSF51695, at 12,047 to 13,694 8373 mRNA_6: 8374 - SUPERFAMILY--SSF47676, at 13,861 to 19,221 8374 mRNA_7: 8375 - HMMPfam-LIM-domain binding protein-PF01803,PRINTS-Proline rich extensin signature-PR01217, at 20,174 to 22,955 8375 mRNA_8: 8376 - K01194 TREH, treA, treF alpha,alpha-trehalase, at 23,178 to 26,734 8376 mRNA_9: 8377 - Hypothetical Protein, at 28,711 to 29,599 8377
Group Condition mRNA_5 mRNA_6 mRNA_7 mRNA_8 mRNA_9
8373 8374 8375 8376 8377
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.1 -1.1 -0.2 -0.4
growth on ricinoleic acid YNB Glucose -0.0 +0.1 -0.4 -0.0 -0.3
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.4 -0.6 +0.1 +0.2
auxotrophy Dropout Complete -0.2 -0.2 -0.5 +0.1 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.1 -0.2 -0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.1 -0.4 +0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.4 +0.1 -0.1 -0.1 +0.0
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.3 -0.4 +0.2 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.0 -0.8 +0.1 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 +0.3 -0.4 -0.2 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.0 +0.1 -0.3 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -0.0 +0.1 +0.0 -0.2
auxotrophy YNB Glucose +0.3 -0.3 -0.5 +0.2 +0.4
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.2 -0.0 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.2 -0.3 -0.0 +0.1
growth on oleic acid YNB Glucose +0.0 -0.0 -0.2 +0.2 +0.2
growth on oleic acid YNB Oleic Acid +0.3 -0.1 -0.4 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.5 -0.6 +0.1 +0.1
growth on ypd YPD +0.4 -0.2 +0.3 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.1 +0.0 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.3 -0.0 -0.1 +0.3
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