Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
8374 and 8375 are separated by 952 nucleotides
8375 and 8376 are separated by 222 nucleotides
8376 and 8377 are separated by 1976 nucleotides
8377 and 8378 are separated by 267 nucleotides
mRNA_6: 8374 - SUPERFAMILY--SSF47676, at 13,861 to 19,221
8374
mRNA_7: 8375 - HMMPfam-LIM-domain binding protein-PF01803,PRINTS-Proline rich extensin signature-PR01217, at 20,174 to 22,955
8375
mRNA_8: 8376 - K01194 TREH, treA, treF alpha,alpha-trehalase, at 23,178 to 26,734
8376
mRNA_9: 8377 - Hypothetical Protein, at 28,711 to 29,599
8377
mRNA_10: 8378 - Hypothetical Protein, at 29,867 to 30,741
8378
Group
Condition
mRNA
_6
mRNA
_7
mRNA
_8
mRNA
_9
mRNA
_10
8374
8375
8376
8377
8378
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
-0.8
+0.1
+0.3
-1.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-1.1
-0.2
-0.4
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.2
-0.0
-0.2
-0.6
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
+0.1
+0.0
-0.2
-0.7
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.4
+0.1
-0.0
-0.5
auxotrophy
YNB Glucose 75mM Methionine
-0.3
-0.4
+0.2
+0.0
-0.1
growth on ricinoleic acid
YNB Glucose
+0.1
-0.4
-0.0
-0.3
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.4
-0.6
+0.1
+0.2
+0.3
growth on oleic acid
YNB Oleic Acid
-0.1
-0.4
+0.2
+0.3
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
+0.1
-0.3
-0.2
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
-0.4
-0.2
-0.4
+0.3
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.0
+0.2
-0.0
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
-0.3
-0.0
+0.1
-0.1
auxotrophy
Dropout Complete
-0.2
-0.5
+0.1
+0.2
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.1
-0.1
+0.0
+0.0
growth on oleic acid
YNB Glucose
-0.0
-0.2
+0.2
+0.2
-0.1
auxotrophy
YNB Glucose
-0.3
-0.5
+0.2
+0.4
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.0
+0.1
+0.3
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.5
-0.6
+0.1
+0.1
+0.2
growth on ypd
YPD
-0.2
+0.3
+0.1
-0.0
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
-0.0
-0.1
+0.3
+0.3
remove
mRNA_6
plot
remove
mRNA_7
plot
remove
mRNA_8
remove
mRNA_9
plot
remove
mRNA_10
plot