Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8375 and 8376 are separated by 222 nucleotides8376 and 8377 are separated by 1976 nucleotides8377 and 8378 are separated by 267 nucleotides8378 and 8379 are separated by 444 nucleotides mRNA_7: 8375 - HMMPfam-LIM-domain binding protein-PF01803,PRINTS-Proline rich extensin signature-PR01217, at 20,174 to 22,955 8375 mRNA_8: 8376 - K01194 TREH, treA, treF alpha,alpha-trehalase, at 23,178 to 26,734 8376 mRNA_9: 8377 - Hypothetical Protein, at 28,711 to 29,599 8377 mRNA_10: 8378 - Hypothetical Protein, at 29,867 to 30,741 8378 mRNA_11: 8379 - Hypothetical Protein, at 31,186 to 32,050 8379
Group Condition mRNA_7 mRNA_8 mRNA_9 mRNA_10 mRNA_11
8375 8376 8377 8378 8379
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.0 -0.2 -0.7 -1.2
growth on ricinoleic acid YNB Methylricinoleic Acid -1.1 -0.2 -0.4 +0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.8 +0.1 +0.3 -1.4 +0.3
growth on ricinoleic acid YNB Glucose -0.4 -0.0 -0.3 +0.2 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.0 -0.2 -0.6 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.4 +0.1 -0.0 -0.5 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.2 -0.0 -0.4 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.3 -0.2 +0.1 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -0.2 -0.4 +0.3 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.4 +0.2 +0.0 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 +0.1 +0.1 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.0 +0.1 -0.1 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 +0.0 +0.0 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.6 +0.1 +0.2 +0.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.1 +0.3 -0.3 -0.2
growth on oleic acid YNB Oleic Acid -0.4 +0.2 +0.3 -0.4 +0.3
auxotrophy Dropout Complete -0.5 +0.1 +0.2 +0.3 -0.0
growth on oleic acid YNB Glucose -0.2 +0.2 +0.2 -0.1 +0.3
auxotrophy YNB Glucose -0.5 +0.2 +0.4 +0.4 -0.1
growth on ypd YPD +0.3 +0.1 -0.0 +0.4 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.1 +0.3 +0.3 +0.4
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