Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
8380 and 8381 are separated by 362 nucleotides
8381 and 8382 are separated by 1636 nucleotides
8382 and 8383 are separated by 1069 nucleotides
8383 and 8384 are separated by 242 nucleotides
mRNA_12: 8380 - K12757 MYL12 myosin regulatory light chain 12, at 32,509 to 33,351
8380
mRNA_13: 8381 - BLAST putative transmembrane protein [Rhizoctonia solani 123E], at 33,714 to 35,045
8381
mRNA_14: 8382 - K07199 PRKAB 5'-AMP-activated protein kinase, regulatory beta subunit, at 36,682 to 38,243
8382
mRNA_15: 8383 - K02321 POLA2 DNA polymerase alpha subunit B, at 39,313 to 41,292
8383
mRNA_16: 8384 - K03407 cheA two-component system, chemotaxis family, sensor kinase CheA, at 41,535 to 45,882
8384
Group
Condition
mRNA
_12
mRNA
_13
mRNA
_14
mRNA
_15
mRNA
_16
8380
8381
8382
8383
8384
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
-1.8
-2.3
N.D.
+0.1
growth on oleic acid
YNB Oleic Acid
-0.1
-0.6
-2.1
N.D.
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.3
-1.3
N.D.
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
-0.9
-0.9
N.D.
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
-0.4
-0.1
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
-0.0
-1.2
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
-0.3
-1.0
N.D.
+0.1
growth on oleic acid
YNB Glucose
+0.1
+0.1
-1.0
N.D.
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.3
+0.1
-0.6
N.D.
+0.0
ypd buoyancy
40 hrs High Buoyancy
-0.3
+0.1
-0.5
N.D.
+0.1
growth on ypd
YPD
-0.1
-0.0
-0.5
N.D.
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.2
-0.7
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.4
+0.0
-0.9
N.D.
+0.2
growth on ricinoleic acid
YNB Glucose
+0.4
-0.5
-0.0
N.D.
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.0
-0.4
N.D.
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
+0.4
-0.8
N.D.
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.5
-0.7
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.3
-0.4
+0.5
N.D.
+0.1
auxotrophy
Dropout Complete
+0.4
+0.0
+0.0
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.4
-0.2
+0.3
N.D.
+0.2
auxotrophy
YNB Glucose
+0.3
-0.3
+0.5
N.D.
+0.3
remove
mRNA_12
plot
remove
mRNA_13
plot
remove
mRNA_14
remove
mRNA_15
plot
remove
mRNA_16
plot