Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8384 and 8385 are separated by 2737 nucleotides8385 and 8386 are separated by 330 nucleotides8386 and 8387 are separated by 379 nucleotides8387 and 8388 are separated by 376 nucleotides mRNA_16: 8384 - K03407 cheA two-component system, chemotaxis family, sensor kinase CheA, at 41,535 to 45,882 8384 mRNA_17: 8385 - K00856 E2.7.1.20, ADK adenosine kinase, at 48,620 to 50,142 8385 mRNA_18: 8386 - KOG1515 Arylacetamide deacetylase, at 50,473 to 51,921 8386 mRNA_19: 8387 - KOG1399 Flavin-containing monooxygenase, at 52,301 to 54,654 8387 mRNA_20: 8388 - KOG0519 Sensory transduction histidine kinase, at 55,031 to 59,299 8388
Group Condition mRNA_16 mRNA_17 mRNA_18 mRNA_19 mRNA_20
8384 8385 8386 8387 8388
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 N.D. -0.0 -0.2 -0.6
growth on ypd YPD -0.1 N.D. -0.2 -0.3 -0.2
growth on ricinoleic acid YNB Glucose -0.1 N.D. -0.1 +0.0 -0.4
auxotrophy Dropout Complete +0.2 N.D. -0.2 -0.4 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. -0.1 -0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. -0.1 -0.3 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 N.D. -0.4 +0.1 -0.3
growth on oleic acid YNB Glucose -0.0 N.D. +0.2 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 N.D. -0.0 -0.0 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 N.D. +0.1 -0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. -0.3 +0.2 +0.0
growth on oleic acid YNB Oleic Acid -0.0 N.D. +0.1 -0.1 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. -0.3 +0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. -0.1 +0.0 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. +0.1 -0.0 +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.0 N.D. -0.0 +0.0 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. +0.1 +0.1 -0.1
auxotrophy YNB Glucose +0.3 N.D. +0.1 -0.3 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. +0.1 +0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. -0.0 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. +0.0 +0.3 -0.1
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