Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8386 and 8387 are separated by 379 nucleotides8387 and 8388 are separated by 376 nucleotides8388 and 8389 are separated by 220 nucleotides8389 and 8390 are separated by 554 nucleotides mRNA_18: 8386 - KOG1515 Arylacetamide deacetylase, at 50,473 to 51,921 8386 mRNA_19: 8387 - KOG1399 Flavin-containing monooxygenase, at 52,301 to 54,654 8387 mRNA_20: 8388 - KOG0519 Sensory transduction histidine kinase, at 55,031 to 59,299 8388 mRNA_21: 8389 - SUPERFAMILY--SSF51045, at 59,520 to 60,624 8389 mRNA_22: 8390 - SUPERFAMILY--SSF51045, at 61,179 to 62,127 8390
Group Condition mRNA_18 mRNA_19 mRNA_20 mRNA_21 mRNA_22
8386 8387 8388 8389 8390
auxotrophy Dropout Complete -0.2 -0.4 +0.1 -0.3 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.1 -0.3 -0.4 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +0.1 +0.1 -1.3 +0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.3 +0.1 -0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.2 +0.0 -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.1 +0.2 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.2 -0.1 +0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.0 +0.1 -0.1 -0.0
growth on ricinoleic acid YNB Glucose -0.1 +0.0 -0.4 +0.4 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.2 -0.6 +0.5 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.0 +0.2 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.3 -0.1 -0.7 +0.5
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.0 +0.0 +0.1 -0.1
growth on oleic acid YNB Glucose +0.2 -0.1 -0.2 -0.1 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.0 +0.0 -0.2 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.1 -0.2 +0.0 +0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.2 -0.1 -0.0 +0.1
growth on oleic acid YNB Oleic Acid +0.1 -0.1 +0.0 +0.4 +0.0
growth on ypd YPD -0.2 -0.3 -0.2 +1.5 -0.2
auxotrophy YNB Glucose +0.1 -0.3 +0.2 +0.5 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.1 -0.1 +0.6 +0.1
remove
mRNA_18
plot
remove
mRNA_19
plot
remove
mRNA_20
remove
mRNA_21
plot
remove
mRNA_22
plot