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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8387 and 8388 are separated by 376 nucleotides
8388 and 8389 are separated by 220 nucleotides
8389 and 8390 are separated by 554 nucleotides
8390 and 8391 are separated by 246 nucleotides
mRNA_19: 8387 - KOG1399 Flavin-containing monooxygenase, at 52,301 to 54,654
8387
mRNA_20: 8388 - KOG0519 Sensory transduction histidine kinase, at 55,031 to 59,299
8388
mRNA_21: 8389 - SUPERFAMILY--SSF51045, at 59,520 to 60,624
8389
mRNA_22: 8390 - SUPERFAMILY--SSF51045, at 61,179 to 62,127
8390
mRNA_23: 8391 - K02938 RP-L8e, RPL8 large subunit ribosomal protein L8e, at 62,374 to 63,560
8391
Group
Condition
mRNA
_19
mRNA
_20
mRNA
_21
mRNA
_22
mRNA
_23
8387
8388
8389
8390
8391
auxotrophy
Dropout Complete
-0.4
+0.1
-0.3
-0.4
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-0.3
-0.4
-0.2
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
+0.1
-1.3
+0.3
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.1
-0.1
-0.3
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.2
-0.3
-0.3
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.6
+0.5
+0.2
N.D.
growth on ricinoleic acid
YNB Glucose
+0.0
-0.4
+0.4
-0.1
N.D.
growth on oleic acid
YNB Glucose
-0.1
-0.2
-0.1
+0.3
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.1
+0.3
-0.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.1
-0.1
-0.0
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.0
-0.2
-0.1
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.0
+0.2
+0.1
-0.3
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.0
+0.1
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
-0.1
-0.7
+0.5
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.2
+0.0
+0.4
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
+0.0
-0.2
+0.4
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-0.1
-0.0
+0.1
N.D.
auxotrophy
YNB Glucose
-0.3
+0.2
+0.5
+0.1
N.D.
growth on oleic acid
YNB Oleic Acid
-0.1
+0.0
+0.4
+0.0
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.1
+0.6
+0.1
N.D.
growth on ypd
YPD
-0.3
-0.2
+1.5
-0.2
N.D.
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