Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8388 and 8389 are separated by 220 nucleotides8389 and 8390 are separated by 554 nucleotides8390 and 8391 are separated by 246 nucleotides8391 and 8392 are separated by 964 nucleotides mRNA_20: 8388 - KOG0519 Sensory transduction histidine kinase, at 55,031 to 59,299 8388 mRNA_21: 8389 - SUPERFAMILY--SSF51045, at 59,520 to 60,624 8389 mRNA_22: 8390 - SUPERFAMILY--SSF51045, at 61,179 to 62,127 8390 mRNA_23: 8391 - K02938 RP-L8e, RPL8 large subunit ribosomal protein L8e, at 62,374 to 63,560 8391 mRNA_24: 8392 - Hypothetical Protein, at 64,525 to 65,394 8392
Group Condition mRNA_20 mRNA_21 mRNA_22 mRNA_23 mRNA_24
8388 8389 8390 8391 8392
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -1.3 +0.3 N.D. -0.6
auxotrophy Dropout Complete +0.1 -0.3 -0.4 N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.1 -0.1 N.D. -0.6
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.2 -0.1 N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.7 +0.5 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.1 -0.3 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.3 -0.3 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.4 -0.2 N.D. +0.8
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.0 +0.1 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 -0.0 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.0 +0.4 N.D. -0.2
growth on ricinoleic acid YNB Glucose -0.4 +0.4 -0.1 N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.1 -0.3 N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 +0.5 +0.2 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.2 +0.4 N.D. +0.1
auxotrophy YNB Glucose +0.2 +0.5 +0.1 N.D. -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.3 -0.1 N.D. +0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.6 +0.1 N.D. +0.0
growth on oleic acid YNB Glucose -0.2 -0.1 +0.3 N.D. +0.8
growth on ypd YPD -0.2 +1.5 -0.2 N.D. -0.2
growth on oleic acid YNB Oleic Acid +0.0 +0.4 +0.0 N.D. +0.6
remove
mRNA_20
plot
remove
mRNA_21
plot
remove
mRNA_22
remove
mRNA_23
plot
remove
mRNA_24
plot