Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
8390 and 8391 are separated by 246 nucleotides
8391 and 8392 are separated by 964 nucleotides
8392 and 8393 are separated by 1111 nucleotides
8393 and 8394 are separated by 561 nucleotides
mRNA_22: 8390 - SUPERFAMILY--SSF51045, at 61,179 to 62,127
8390
mRNA_23: 8391 - K02938 RP-L8e, RPL8 large subunit ribosomal protein L8e, at 62,374 to 63,560
8391
mRNA_24: 8392 - Hypothetical Protein, at 64,525 to 65,394
8392
mRNA_25: 8393 - Hypothetical Protein, at 66,506 to 67,548
8393
mRNA_26: 8394 - K04499 RUVBL1, RVB1, INO80H RuvB-like protein 1 (pontin 52), at 68,110 to 69,853
8394
Group
Condition
mRNA
_22
mRNA
_23
mRNA
_24
mRNA
_25
mRNA
_26
8390
8391
8392
8393
8394
ypd buoyancy
40 hrs Low Buoyancy
-0.3
N.D.
+0.2
-1.5
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
N.D.
-0.2
-0.8
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
N.D.
-0.6
-0.7
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
N.D.
-0.1
-0.9
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.1
N.D.
-0.6
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.5
N.D.
-0.1
-1.2
N.D.
growth on ypd
YPD
-0.2
N.D.
-0.2
-0.2
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.3
N.D.
-0.1
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
N.D.
-0.2
-0.6
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.3
N.D.
+0.1
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
N.D.
+0.1
-0.9
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.0
N.D.
+0.1
-0.4
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
N.D.
+0.4
-0.3
N.D.
growth on ricinoleic acid
YNB Glucose
-0.1
N.D.
+0.2
+0.1
N.D.
auxotrophy
YNB Glucose
+0.1
N.D.
-0.3
+0.4
N.D.
auxotrophy
Dropout Complete
-0.4
N.D.
+0.1
+0.7
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
N.D.
+0.8
-0.2
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
N.D.
+0.0
+0.6
N.D.
growth on oleic acid
YNB Oleic Acid
+0.0
N.D.
+0.6
+0.2
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
N.D.
+0.2
+0.6
N.D.
growth on oleic acid
YNB Glucose
+0.3
N.D.
+0.8
+0.2
N.D.
remove
mRNA_22
plot
remove
mRNA_23
plot
remove
mRNA_24
remove
mRNA_25
plot
remove
mRNA_26
plot