Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8397 and 8398 are separated by 247 nucleotides8398 and 8399 are separated by 84 nucleotides8399 and 8400 are separated by 294 nucleotides8400 and 8401 are separated by 355 nucleotides mRNA_29: 8397 - HMMPfam-Swi5-PF07061, at 74,095 to 74,821 8397 mRNA_30: 8398 - KOG2798 Putative trehalase, at 75,069 to 76,780 8398 mRNA_31: 8399 - K01520 dut, DUT dUTP pyrophosphatase, at 76,865 to 77,832 8399 mRNA_32: 8400 - HMMPfam-Pre-rRNA-processing protein TSR2-PF10273, at 78,127 to 78,849 8400 mRNA_33: 8401 - HMMPfam-Myosin-binding striated muscle assembly central-PF11701,SUPERFAMILY--SSF48371, at 79,205 to 81,384 8401
Group Condition mRNA_29 mRNA_30 mRNA_31 mRNA_32 mRNA_33
8397 8398 8399 8400 8401
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.2 N.D. N.D. -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.7 N.D. N.D. +0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.2 N.D. N.D. +0.0
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.5 N.D. N.D. +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.1 N.D. N.D. -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.2 N.D. N.D. -0.6
auxotrophy YNB Glucose -0.1 -0.6 N.D. N.D. +0.6
auxotrophy Dropout Complete -0.5 -0.5 N.D. N.D. +0.8
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.6 N.D. N.D. +0.6
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.4 N.D. N.D. +0.6
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -0.2 N.D. N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.2 N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.5 N.D. N.D. +0.6
growth on oleic acid YNB Glucose -0.1 -0.5 N.D. N.D. +0.9
growth on ricinoleic acid YNB Glucose -0.0 -0.5 N.D. N.D. +1.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.3 N.D. N.D. +0.9
growth on ypd YPD +0.1 +0.1 N.D. N.D. +0.7
growth on oleic acid YNB Oleic Acid -0.1 -0.1 N.D. N.D. +1.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.6 N.D. N.D. +1.8
facs on lipid accumulation Sorted High BODIPY Gate +0.4 +0.2 N.D. N.D. +0.7
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.5 N.D. N.D. +2.1
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