Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8400 and 8401 are separated by 355 nucleotides8401 and 8402 are separated by 145 nucleotides8402 and 8403 are separated by 657 nucleotides8403 and 8404 are separated by 170 nucleotides mRNA_32: 8400 - HMMPfam-Pre-rRNA-processing protein TSR2-PF10273, at 78,127 to 78,849 8400 mRNA_33: 8401 - HMMPfam-Myosin-binding striated muscle assembly central-PF11701,SUPERFAMILY--SSF48371, at 79,205 to 81,384 8401 mRNA_34: 8402 - BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ..., at 81,530 to 84,325 8402 mRNA_35: 8403 - KOG1611 Predicted short chain-type dehydrogenase, at 84,983 to 86,013 8403 mRNA_36: 8404 - K00694 bcsA cellulose synthase (UDP-forming), at 86,184 to 90,147 8404
Group Condition mRNA_32 mRNA_33 mRNA_34 mRNA_35 mRNA_36
8400 8401 8402 8403 8404
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.7 -3.5 -0.2 +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.2 -2.2 -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.6 -2.2 -0.1 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +1.8 -3.1 -0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.6 -1.1 +0.2 +0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.1 -1.5 +0.3 +0.0
auxotrophy YNB Glucose 75mM Arginine N.D. +0.4 -1.1 -0.1 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +2.1 -3.0 +0.1 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.2 -0.1 -0.0 -0.0
auxotrophy Dropout Complete N.D. +0.8 -1.3 -0.0 +0.3
growth on ricinoleic acid YNB Glucose N.D. +1.0 -1.0 -0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. +0.6 -0.8 +0.0 +0.1
growth on oleic acid YNB Glucose N.D. +0.9 -1.2 -0.0 +0.2
auxotrophy YNB Glucose N.D. +0.6 -1.1 +0.2 +0.3
growth on oleic acid YNB Oleic Acid N.D. +1.3 -1.1 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 +1.2 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.2 +0.7 -0.1 +0.3
growth on ypd YPD N.D. +0.7 +0.1 +0.2 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.6 +1.1 -0.2 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.9 +0.9 +0.0 +0.3
ypd buoyancy 40 hrs High Buoyancy N.D. +0.0 +2.3 +0.1 -0.0
remove
mRNA_32
plot
remove
mRNA_33
plot
remove
mRNA_34
remove
mRNA_35
plot
remove
mRNA_36
plot