Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 8402 and 8403 are separated by 657 nucleotides8403 and 8404 are separated by 170 nucleotides8404 and 8405 are separated by 760 nucleotides8405 and 8406 are separated by 409 nucleotides mRNA_34: 8402 - BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ..., at 81,530 to 84,325 8402 mRNA_35: 8403 - KOG1611 Predicted short chain-type dehydrogenase, at 84,983 to 86,013 8403 mRNA_36: 8404 - K00694 bcsA cellulose synthase (UDP-forming), at 86,184 to 90,147 8404 mRNA_37: 8405 - HMMPfam-Variant SH3 domain-PF14604,ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044, at 90,908 to 93,083 8405 mRNA_38: 8406 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097, at 93,493 to 94,436 8406
Group Condition mRNA_34 mRNA_35 mRNA_36 mRNA_37 mRNA_38
8402 8403 8404 8405 8406
growth on ricinoleic acid YNB Methylricinoleic Acid -3.1 -0.2 -0.1 -0.1 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -3.5 -0.2 +0.2 +0.6 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid -3.0 +0.1 +0.3 +0.5 -0.4
ypd buoyancy 40 hrs Low Buoyancy -2.2 -0.1 +0.0 -0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy -2.2 -0.1 -0.1 -0.1 +0.1
growth on ricinoleic acid YNB Glucose -1.0 -0.2 +0.1 +0.2 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.0 -0.0 -0.3 -0.7
auxotrophy YNB Glucose 75mM Arginine -1.1 -0.1 +0.2 +0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -1.1 +0.2 +0.2 -0.2 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -1.5 +0.3 +0.0 +0.2 +0.1
auxotrophy Dropout Complete -1.3 -0.0 +0.3 +0.2 +0.0
auxotrophy YNB Glucose -1.1 +0.2 +0.3 +0.3 +0.0
growth on oleic acid YNB Oleic Acid -1.1 +0.2 +0.1 +0.4 +0.1
growth on oleic acid YNB Glucose -1.2 -0.0 +0.2 +0.6 +0.3
auxotrophy YNB Glucose 75mM Methionine -0.8 +0.0 +0.1 +0.4 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.2 -0.2 -0.1 -0.4 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.7 -0.1 +0.3 -0.1 -0.1
growth on ypd YPD +0.1 +0.2 +0.5 +0.4 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +1.1 -0.2 +0.2 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.9 +0.0 +0.3 +0.3 +0.1
ypd buoyancy 40 hrs High Buoyancy +2.3 +0.1 -0.0 +0.0 -0.1
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