Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8403 and 8404 are separated by 170 nucleotides8404 and 8405 are separated by 760 nucleotides8405 and 8406 are separated by 409 nucleotides8406 and 8407 are separated by 428 nucleotides mRNA_35: 8403 - KOG1611 Predicted short chain-type dehydrogenase, at 84,983 to 86,013 8403 mRNA_36: 8404 - K00694 bcsA cellulose synthase (UDP-forming), at 86,184 to 90,147 8404 mRNA_37: 8405 - HMMPfam-Variant SH3 domain-PF14604,ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044, at 90,908 to 93,083 8405 mRNA_38: 8406 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097, at 93,493 to 94,436 8406 mRNA_39: 8407 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,SUPERFAMILY--SSF54695, at 94,865 to 95,759 8407
Group Condition mRNA_35 mRNA_36 mRNA_37 mRNA_38 mRNA_39
8403 8404 8405 8406 8407
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.0 -0.3 -0.7 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.1 -0.1 -0.5 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.1 -0.4 +0.1 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.0 -0.1 -0.0 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 -0.1 +0.1 -0.0
growth on ricinoleic acid YNB Glucose -0.2 +0.1 +0.2 -0.3 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.0 +0.0 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.3 -0.1 -0.1 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.2 -0.2 +0.0 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.2 +0.2 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.2 +0.1 +0.2 -0.1
auxotrophy Dropout Complete -0.0 +0.3 +0.2 +0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.3 +0.5 -0.4 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.0 +0.2 +0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.1 +0.4 +0.2 -0.0
growth on ypd YPD +0.2 +0.5 +0.4 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.3 +0.3 +0.1 +0.1
auxotrophy YNB Glucose +0.2 +0.3 +0.3 +0.0 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.2 +0.6 +0.3 +0.2
growth on oleic acid YNB Oleic Acid +0.2 +0.1 +0.4 +0.1 +0.4
growth on oleic acid YNB Glucose -0.0 +0.2 +0.6 +0.3 +0.3
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