Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8404 and 8405 are separated by 760 nucleotides8405 and 8406 are separated by 409 nucleotides8406 and 8407 are separated by 428 nucleotides8407 and 8408 are separated by 368 nucleotides mRNA_36: 8404 - K00694 bcsA cellulose synthase (UDP-forming), at 86,184 to 90,147 8404 mRNA_37: 8405 - HMMPfam-Variant SH3 domain-PF14604,ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044, at 90,908 to 93,083 8405 mRNA_38: 8406 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097, at 93,493 to 94,436 8406 mRNA_39: 8407 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,SUPERFAMILY--SSF54695, at 94,865 to 95,759 8407 mRNA_40: 8408 - Hypothetical Protein, at 96,128 to 97,227 8408
Group Condition mRNA_36 mRNA_37 mRNA_38 mRNA_39 mRNA_40
8404 8405 8406 8407 8408
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.3 -0.7 -0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.1 -0.5 -0.1 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.1 -0.0 -0.0 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.4 +0.1 +0.2 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 +0.1 -0.0 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.0 -0.1 -0.0 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.1 -0.1 +0.0 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.2 +0.0 -0.2 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.2 -0.1 -0.0 -0.1
auxotrophy Dropout Complete +0.3 +0.2 +0.0 -0.1 -0.1
growth on ricinoleic acid YNB Glucose +0.1 +0.2 -0.3 +0.2 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.2 +0.1 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.1 +0.2 -0.1 -0.0
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.4 +0.2 -0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.5 -0.4 +0.1 +0.1
auxotrophy YNB Glucose +0.3 +0.3 +0.0 +0.1 -0.1
growth on ypd YPD +0.5 +0.4 -0.2 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.3 +0.1 +0.1 +0.0
growth on oleic acid YNB Oleic Acid +0.1 +0.4 +0.1 +0.4 +0.1
growth on oleic acid YNB Glucose +0.2 +0.6 +0.3 +0.3 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.6 +0.3 +0.2 +0.2
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