Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8405 and 8406 are separated by 409 nucleotides8406 and 8407 are separated by 428 nucleotides8407 and 8408 are separated by 368 nucleotides8408 and 8409 are separated by 327 nucleotides mRNA_37: 8405 - HMMPfam-Variant SH3 domain-PF14604,ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044, at 90,908 to 93,083 8405 mRNA_38: 8406 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097, at 93,493 to 94,436 8406 mRNA_39: 8407 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,SUPERFAMILY--SSF54695, at 94,865 to 95,759 8407 mRNA_40: 8408 - Hypothetical Protein, at 96,128 to 97,227 8408 mRNA_41: 8409 - K03125 TAF1 transcription initiation factor TFIID subunit 1, at 97,555 to 101,757 8409
Group Condition mRNA_37 mRNA_38 mRNA_39 mRNA_40 mRNA_41
8405 8406 8407 8408 8409
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.7 -0.1 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.5 -0.1 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.1 +0.0 -0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.0 -0.0 +0.0 N.D.
auxotrophy Dropout Complete +0.2 +0.0 -0.1 -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.0 -0.2 +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.1 -0.0 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +0.1 +0.2 +0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.1 -0.0 +0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 -0.0 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.2 -0.1 -0.0 N.D.
growth on ricinoleic acid YNB Glucose +0.2 -0.3 +0.2 +0.1 N.D.
growth on ypd YPD +0.4 -0.2 -0.1 +0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 -0.4 +0.1 +0.1 N.D.
auxotrophy YNB Glucose +0.3 +0.0 +0.1 -0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.1 +0.1 +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.2 -0.0 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.1 +0.1 +0.0 N.D.
growth on oleic acid YNB Oleic Acid +0.4 +0.1 +0.4 +0.1 N.D.
growth on oleic acid YNB Glucose +0.6 +0.3 +0.3 +0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.6 +0.3 +0.2 +0.2 N.D.
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