Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8407 and 8408 are separated by 368 nucleotides8408 and 8409 are separated by 327 nucleotides8409 and 8410 are separated by 199 nucleotides8410 and 8411 are separated by 191 nucleotides mRNA_39: 8407 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,SUPERFAMILY--SSF54695, at 94,865 to 95,759 8407 mRNA_40: 8408 - Hypothetical Protein, at 96,128 to 97,227 8408 mRNA_41: 8409 - K03125 TAF1 transcription initiation factor TFIID subunit 1, at 97,555 to 101,757 8409 mRNA_42: 8410 - K09494 CCT2 T-complex protein 1 subunit beta, at 101,957 to 104,570 8410 mRNA_43: 8411 - K05609 UCHL3, YUH1 ubiquitin carboxyl-terminal hydrolase L3, at 104,762 to 105,972 8411
Group Condition mRNA_39 mRNA_40 mRNA_41 mRNA_42 mRNA_43
8407 8408 8409 8410 8411
auxotrophy Dropout Complete -0.1 -0.1 N.D. N.D. -0.6
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.1 N.D. N.D. -0.4
auxotrophy YNB Glucose +0.1 -0.1 N.D. N.D. -0.5
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.1 N.D. N.D. -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.0 N.D. N.D. -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.3 N.D. N.D. -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.1 N.D. N.D. -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.2 N.D. N.D. -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.3 N.D. N.D. -0.2
growth on ypd YPD -0.1 +0.2 N.D. N.D. +0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.1 N.D. N.D. +0.3
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.2 N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.0 N.D. N.D. +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.2 N.D. N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.1 N.D. N.D. -0.0
growth on ricinoleic acid YNB Glucose +0.2 +0.1 N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.0 N.D. N.D. +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.2 N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.0 N.D. N.D. +0.4
growth on oleic acid YNB Glucose +0.3 +0.0 N.D. N.D. +0.1
growth on oleic acid YNB Oleic Acid +0.4 +0.1 N.D. N.D. -0.2
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