Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8408 and 8409 are separated by 327 nucleotides8409 and 8410 are separated by 199 nucleotides8410 and 8411 are separated by 191 nucleotides8411 and 8412 are separated by 224 nucleotides mRNA_40: 8408 - Hypothetical Protein, at 96,128 to 97,227 8408 mRNA_41: 8409 - K03125 TAF1 transcription initiation factor TFIID subunit 1, at 97,555 to 101,757 8409 mRNA_42: 8410 - K09494 CCT2 T-complex protein 1 subunit beta, at 101,957 to 104,570 8410 mRNA_43: 8411 - K05609 UCHL3, YUH1 ubiquitin carboxyl-terminal hydrolase L3, at 104,762 to 105,972 8411 mRNA_44: 8412 - Hypothetical Protein, at 106,197 to 108,340 8412
Group Condition mRNA_40 mRNA_41 mRNA_42 mRNA_43 mRNA_44
8408 8409 8410 8411 8412
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. N.D. -0.4 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. N.D. -0.3 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.0 N.D. N.D. -0.3 -0.4
growth on oleic acid YNB Glucose +0.0 N.D. N.D. +0.1 -0.5
auxotrophy Dropout Complete -0.1 N.D. N.D. -0.6 +0.3
auxotrophy YNB Glucose -0.1 N.D. N.D. -0.5 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. N.D. -0.2 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 N.D. N.D. +0.1 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. N.D. -0.3 -0.0
growth on oleic acid YNB Oleic Acid +0.1 N.D. N.D. -0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 N.D. N.D. -0.2 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 N.D. N.D. -0.3 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. N.D. -0.1 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 N.D. N.D. +0.3 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 N.D. N.D. +0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. N.D. -0.0 -0.1
growth on ricinoleic acid YNB Glucose +0.1 N.D. N.D. -0.1 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 N.D. N.D. +0.4 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. N.D. -0.1 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.2 N.D. N.D. -0.2 +0.3
growth on ypd YPD +0.2 N.D. N.D. +0.0 +0.3
remove
mRNA_40
plot
remove
mRNA_41
plot
remove
mRNA_42
remove
mRNA_43
plot
remove
mRNA_44
plot