Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8409 and 8410 are separated by 199 nucleotides8410 and 8411 are separated by 191 nucleotides8411 and 8412 are separated by 224 nucleotides8412 and 8413 are separated by 170 nucleotides mRNA_41: 8409 - K03125 TAF1 transcription initiation factor TFIID subunit 1, at 97,555 to 101,757 8409 mRNA_42: 8410 - K09494 CCT2 T-complex protein 1 subunit beta, at 101,957 to 104,570 8410 mRNA_43: 8411 - K05609 UCHL3, YUH1 ubiquitin carboxyl-terminal hydrolase L3, at 104,762 to 105,972 8411 mRNA_44: 8412 - Hypothetical Protein, at 106,197 to 108,340 8412 mRNA_45: 8413 - SUPERFAMILY--SSF51445, at 108,511 to 110,701 8413
Group Condition mRNA_41 mRNA_42 mRNA_43 mRNA_44 mRNA_45
8409 8410 8411 8412 8413
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.3 -0.4 +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.3 -0.3 +0.0
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.4 -0.4 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -0.3 -0.2 -0.1
growth on oleic acid YNB Glucose N.D. N.D. +0.1 -0.5 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.2 -0.4 +0.1
growth on oleic acid YNB Oleic Acid N.D. N.D. -0.2 -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.3 -0.0 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.2 -0.3 +0.2
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.1 +0.0 -0.1
auxotrophy YNB Glucose N.D. N.D. -0.5 +0.3 +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.1 -0.2 +0.1
auxotrophy Dropout Complete N.D. N.D. -0.6 +0.3 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. +0.3 -0.3 +0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.0 -0.1 +0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.2 +0.3 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.1 -0.4 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.4 -0.3 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.2 -0.1 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -0.1 +0.2 +0.4
growth on ypd YPD N.D. N.D. +0.0 +0.3 +0.4
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