Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8411 and 8412 are separated by 224 nucleotides8412 and 8413 are separated by 170 nucleotides8413 and 8414 are separated by 372 nucleotides8414 and 8415 are separated by 339 nucleotides mRNA_43: 8411 - K05609 UCHL3, YUH1 ubiquitin carboxyl-terminal hydrolase L3, at 104,762 to 105,972 8411 mRNA_44: 8412 - Hypothetical Protein, at 106,197 to 108,340 8412 mRNA_45: 8413 - SUPERFAMILY--SSF51445, at 108,511 to 110,701 8413 mRNA_46: 8414 - HMMPfam-Protein of unknown function (DUF3292)-PF11696, at 111,074 to 114,249 8414 mRNA_47: 8415 - HMMPfam-Serine hydrolase (FSH1)-PF03959,SUPERFAMILY--SSF53474, at 114,589 to 115,599 8415
Group Condition mRNA_43 mRNA_44 mRNA_45 mRNA_46 mRNA_47
8411 8412 8413 8414 8415
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.2 -0.1 -0.2 -0.1
growth on oleic acid YNB Glucose +0.1 -0.5 -0.1 -0.1 -0.2
growth on oleic acid YNB Oleic Acid -0.2 -0.2 -0.1 +0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.4 +0.1 +0.0 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.4 +0.2 -0.1 +0.3
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.3 +0.0 -0.1 +0.3
growth on ricinoleic acid YNB Glucose -0.1 +0.0 -0.1 -0.1 -0.1
auxotrophy Dropout Complete -0.6 +0.3 +0.2 -0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.2 +0.1 -0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.4 +0.1 +0.0 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.0 -0.0 +0.1 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.3 +0.2 +0.1 +0.1
auxotrophy YNB Glucose -0.5 +0.3 +0.1 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.4 +0.5 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.1 +0.4 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 -0.3 +0.2 +0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.2 +0.4 -0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.3 +0.1 +0.3 +0.2
growth on ypd YPD +0.0 +0.3 +0.4 -0.0 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.3 +0.1 +0.2 +0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.1 +0.2 +0.2 +0.5
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