Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
8411 and 8412 are separated by 224 nucleotides
8412 and 8413 are separated by 170 nucleotides
8413 and 8414 are separated by 372 nucleotides
8414 and 8415 are separated by 339 nucleotides
mRNA_43: 8411 - K05609 UCHL3, YUH1 ubiquitin carboxyl-terminal hydrolase L3, at 104,762 to 105,972
8411
mRNA_44: 8412 - Hypothetical Protein, at 106,197 to 108,340
8412
mRNA_45: 8413 - SUPERFAMILY--SSF51445, at 108,511 to 110,701
8413
mRNA_46: 8414 - HMMPfam-Protein of unknown function (DUF3292)-PF11696, at 111,074 to 114,249
8414
mRNA_47: 8415 - HMMPfam-Serine hydrolase (FSH1)-PF03959,SUPERFAMILY--SSF53474, at 114,589 to 115,599
8415
Group
Condition
mRNA
_43
mRNA
_44
mRNA
_45
mRNA
_46
mRNA
_47
8411
8412
8413
8414
8415
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.2
-0.1
-0.2
-0.1
growth on oleic acid
YNB Glucose
+0.1
-0.5
-0.1
-0.1
-0.2
growth on oleic acid
YNB Oleic Acid
-0.2
-0.2
-0.1
+0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.4
+0.1
+0.0
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.4
-0.4
+0.2
-0.1
+0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.3
-0.3
+0.0
-0.1
+0.3
growth on ricinoleic acid
YNB Glucose
-0.1
+0.0
-0.1
-0.1
-0.1
auxotrophy
Dropout Complete
-0.6
+0.3
+0.2
-0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.2
+0.1
-0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.4
+0.1
+0.0
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
-0.0
-0.0
+0.1
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.3
+0.2
+0.1
+0.1
auxotrophy
YNB Glucose
-0.5
+0.3
+0.1
+0.0
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.4
+0.5
-0.1
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
-0.1
+0.4
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
-0.3
+0.2
+0.0
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.2
+0.4
-0.0
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
-0.3
+0.1
+0.3
+0.2
growth on ypd
YPD
+0.0
+0.3
+0.4
-0.0
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.3
+0.1
+0.2
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
-0.1
+0.2
+0.2
+0.5
remove
mRNA_43
plot
remove
mRNA_44
plot
remove
mRNA_45
remove
mRNA_46
plot
remove
mRNA_47
plot