Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8418 and 8419 are separated by 231 nucleotides8419 and 8420 are separated by 53 nucleotides8420 and 8421 are separated by 210 nucleotides8421 and 8422 are separated by 453 nucleotides mRNA_50: 8418 - KOG1611 Predicted short chain-type dehydrogenase, at 118,975 to 119,840 8418 mRNA_51: 8419 - K10392 KIF1 kinesin family member 1, at 120,072 to 126,065 8419 mRNA_52: 8420 - Hypothetical Protein, at 126,119 to 126,700 8420 mRNA_53: 8421 - K03014 RPB6, POLR2F DNA-directed RNA polymerases I, II, and III subunit RPABC2, at 126,911 to 127,593 8421 mRNA_54: 8422 - KOG1505 Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases, at 128,047 to 129,356 8422
Group Condition mRNA_50 mRNA_51 mRNA_52 mRNA_53 mRNA_54
8418 8419 8420 8421 8422
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.9 -0.7 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.6 -0.3 N.D. -0.3
auxotrophy YNB Glucose -0.2 -0.4 -0.3 N.D. -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 -0.1 -0.4 N.D. -0.1
auxotrophy Dropout Complete -0.2 -0.4 -0.5 N.D. -0.1
growth on ricinoleic acid YNB Glucose -0.2 -0.7 -0.4 N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.5 -0.3 N.D. -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -0.6 -0.1 N.D. +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 +0.4 -0.8 N.D. -0.9
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.2 -0.5 N.D. +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.0 -0.3 N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.1 +0.3 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.1 -0.3 N.D. +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.1 -0.3 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 +0.2 +0.1 N.D. +0.3
growth on oleic acid YNB Glucose -0.1 -0.4 -0.1 N.D. +0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.2 +0.0 N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.0 +0.3 +0.0 N.D. +0.0
growth on ypd YPD +0.2 +0.0 -0.2 N.D. +0.3
growth on oleic acid YNB Oleic Acid +0.1 -0.3 -0.0 N.D. +0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.2 +0.3 N.D. -0.1
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