Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8419 and 8420 are separated by 53 nucleotides8420 and 8421 are separated by 210 nucleotides8421 and 8422 are separated by 453 nucleotides8422 and 8423 are separated by 108 nucleotides mRNA_51: 8419 - K10392 KIF1 kinesin family member 1, at 120,072 to 126,065 8419 mRNA_52: 8420 - Hypothetical Protein, at 126,119 to 126,700 8420 mRNA_53: 8421 - K03014 RPB6, POLR2F DNA-directed RNA polymerases I, II, and III subunit RPABC2, at 126,911 to 127,593 8421 mRNA_54: 8422 - KOG1505 Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases, at 128,047 to 129,356 8422 mRNA_55: 8423 - HMMPfam-Endonuclease/Exonuclease/phosphatase family-PF03372,SUPERFAMILY--SSF56219, at 129,465 to 130,938 8423
Group Condition mRNA_51 mRNA_52 mRNA_53 mRNA_54 mRNA_55
8419 8420 8421 8422 8423
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -0.8 N.D. -0.9 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 -0.7 N.D. -0.1 +0.3
auxotrophy YNB Glucose 75mM Arginine -0.6 -0.3 N.D. -0.3 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.3 N.D. -0.4 +0.1
auxotrophy Dropout Complete -0.4 -0.5 N.D. -0.1 -0.0
auxotrophy YNB Glucose -0.4 -0.3 N.D. -0.3 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.4 N.D. -0.1 -0.2
growth on ricinoleic acid YNB Glucose -0.7 -0.4 N.D. +0.0 +0.4
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.3 N.D. -0.2 +0.2
growth on oleic acid YNB Glucose -0.4 -0.1 N.D. +0.7 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 -0.1 N.D. +0.1 +0.7
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.3 N.D. +0.1 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.5 N.D. +0.0 +0.5
growth on oleic acid YNB Oleic Acid -0.3 -0.0 N.D. +0.8 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.3 N.D. -0.1 +0.4
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.3 N.D. +0.4 +0.5
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.0 N.D. +0.0 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.0 N.D. -0.2 +0.5
growth on ypd YPD +0.0 -0.2 N.D. +0.3 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.3 N.D. -0.1 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.1 N.D. +0.3 +0.3
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