Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8420 and 8421 are separated by 210 nucleotides8421 and 8422 are separated by 453 nucleotides8422 and 8423 are separated by 108 nucleotides8423 and 8424 are separated by 135 nucleotides mRNA_52: 8420 - Hypothetical Protein, at 126,119 to 126,700 8420 mRNA_53: 8421 - K03014 RPB6, POLR2F DNA-directed RNA polymerases I, II, and III subunit RPABC2, at 126,911 to 127,593 8421 mRNA_54: 8422 - KOG1505 Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases, at 128,047 to 129,356 8422 mRNA_55: 8423 - HMMPfam-Endonuclease/Exonuclease/phosphatase family-PF03372,SUPERFAMILY--SSF56219, at 129,465 to 130,938 8423 mRNA_56: 8424 - K09499 CCT7 T-complex protein 1 subunit eta, at 131,074 to 133,280 8424
Group Condition mRNA_52 mRNA_53 mRNA_54 mRNA_55 mRNA_56
8420 8421 8422 8423 8424
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 N.D. -0.9 -0.5 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 N.D. -0.1 -0.2 N.D.
auxotrophy Dropout Complete -0.5 N.D. -0.1 -0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.3 N.D. -0.4 +0.1 N.D.
auxotrophy YNB Glucose -0.3 N.D. -0.3 +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.3 N.D. -0.3 +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 N.D. -0.1 +0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.3 N.D. -0.2 +0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.5 N.D. +0.0 +0.5 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.3 N.D. +0.1 +0.2 N.D.
growth on ricinoleic acid YNB Glucose -0.4 N.D. +0.0 +0.4 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.0 N.D. +0.0 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 N.D. -0.2 +0.5 N.D.
growth on ypd YPD -0.2 N.D. +0.3 +0.4 N.D.
growth on oleic acid YNB Glucose -0.1 N.D. +0.7 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 N.D. -0.1 +0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. +0.4 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 N.D. -0.1 +0.4 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 N.D. +0.3 +0.3 N.D.
growth on oleic acid YNB Oleic Acid -0.0 N.D. +0.8 -0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. +0.1 +0.7 N.D.
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