Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8422 and 8423 are separated by 108 nucleotides8423 and 8424 are separated by 135 nucleotides8424 and 8425 are separated by 361 nucleotides8425 and 8426 are separated by 663 nucleotides mRNA_54: 8422 - KOG1505 Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases, at 128,047 to 129,356 8422 mRNA_55: 8423 - HMMPfam-Endonuclease/Exonuclease/phosphatase family-PF03372,SUPERFAMILY--SSF56219, at 129,465 to 130,938 8423 mRNA_56: 8424 - K09499 CCT7 T-complex protein 1 subunit eta, at 131,074 to 133,280 8424 mRNA_57: 8425 - K15176 CTR9 RNA polymerase-associated protein CTR9, at 133,642 to 138,012 8425 mRNA_58: 8426 - HMMPfam-Arrestin (or S-antigen), N-terminal domain-PF00339,SUPERFAMILY--SSF81296, at 138,676 to 140,962 8426
Group Condition mRNA_54 mRNA_55 mRNA_56 mRNA_57 mRNA_58
8422 8423 8424 8425 8426
ypd buoyancy 40 hrs No Buoyancy Separation -0.9 -0.5 N.D. N.D. -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.2 N.D. N.D. -0.0
auxotrophy YNB Glucose 75mM Methionine -0.4 +0.1 N.D. N.D. +0.0
auxotrophy YNB Glucose -0.3 +0.1 N.D. N.D. +0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 +0.3 N.D. N.D. -0.8
facs on lipid accumulation Sorted High BODIPY Gate +0.0 +0.2 N.D. N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.1 N.D. N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.2 N.D. N.D. +0.0
auxotrophy Dropout Complete -0.1 -0.0 N.D. N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.2 N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.5 N.D. N.D. -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.4 N.D. N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.3 N.D. N.D. +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.3 N.D. N.D. +0.2
growth on ricinoleic acid YNB Glucose +0.0 +0.4 N.D. N.D. -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.5 N.D. N.D. +0.0
growth on ypd YPD +0.3 +0.4 N.D. N.D. +0.0
ypd buoyancy 40 hrs High Buoyancy +0.4 +0.5 N.D. N.D. -0.1
growth on oleic acid YNB Glucose +0.7 -0.1 N.D. N.D. +0.3
growth on oleic acid YNB Oleic Acid +0.8 -0.0 N.D. N.D. +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.7 N.D. N.D. +0.4
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