Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8423 and 8424 are separated by 135 nucleotides8424 and 8425 are separated by 361 nucleotides8425 and 8426 are separated by 663 nucleotides8426 and 8427 are separated by 260 nucleotides mRNA_55: 8423 - HMMPfam-Endonuclease/Exonuclease/phosphatase family-PF03372,SUPERFAMILY--SSF56219, at 129,465 to 130,938 8423 mRNA_56: 8424 - K09499 CCT7 T-complex protein 1 subunit eta, at 131,074 to 133,280 8424 mRNA_57: 8425 - K15176 CTR9 RNA polymerase-associated protein CTR9, at 133,642 to 138,012 8425 mRNA_58: 8426 - HMMPfam-Arrestin (or S-antigen), N-terminal domain-PF00339,SUPERFAMILY--SSF81296, at 138,676 to 140,962 8426 mRNA_59: 8427 - Hypothetical Protein, at 141,223 to 142,116 8427
Group Condition mRNA_55 mRNA_56 mRNA_57 mRNA_58 mRNA_59
8423 8424 8425 8426 8427
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 N.D. N.D. -0.0 -0.8
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 N.D. N.D. -0.8 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. N.D. -0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.2 N.D. N.D. -0.2 -0.1
growth on oleic acid YNB Glucose -0.1 N.D. N.D. +0.3 -0.3
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. N.D. +0.2 -0.3
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. N.D. +0.0 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 N.D. N.D. +0.0 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.2 N.D. N.D. -0.1 +0.0
auxotrophy YNB Glucose +0.1 N.D. N.D. +0.0 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. N.D. +0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 N.D. N.D. -0.0 -0.3
ypd buoyancy 40 hrs High Buoyancy +0.5 N.D. N.D. -0.1 -0.2
growth on oleic acid YNB Oleic Acid -0.0 N.D. N.D. +0.3 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.5 N.D. N.D. +0.0 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 N.D. N.D. +0.2 -0.2
auxotrophy Dropout Complete -0.0 N.D. N.D. +0.2 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 N.D. N.D. +0.2 +0.0
growth on ricinoleic acid YNB Glucose +0.4 N.D. N.D. -0.0 +0.1
growth on ypd YPD +0.4 N.D. N.D. +0.0 +0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.7 N.D. N.D. +0.4 +0.4
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