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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8425 and 8426 are separated by 663 nucleotides
8426 and 8427 are separated by 260 nucleotides
8427 and 8428 are separated by 306 nucleotides
8428 and 8429 are separated by 609 nucleotides
mRNA_57: 8425 - K15176 CTR9 RNA polymerase-associated protein CTR9, at 133,642 to 138,012
8425
mRNA_58: 8426 - HMMPfam-Arrestin (or S-antigen), N-terminal domain-PF00339,SUPERFAMILY--SSF81296, at 138,676 to 140,962
8426
mRNA_59: 8427 - Hypothetical Protein, at 141,223 to 142,116
8427
mRNA_60: 8428 - Hypothetical Protein, at 142,423 to 142,761
8428
mRNA_61: 8429 - SUPERFAMILY--SSF52047, at 143,371 to 144,965
8429
Group
Condition
mRNA
_57
mRNA
_58
mRNA
_59
mRNA
_60
mRNA
_61
8425
8426
8427
8428
8429
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.0
-0.8
-0.0
-1.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.0
-0.1
-0.8
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.0
-0.3
-0.9
+0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.2
-0.3
-1.1
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.8
+0.0
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.2
-0.2
-0.9
+0.4
auxotrophy
YNB Glucose
N.D.
+0.0
+0.0
-0.5
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.0
-0.3
-0.8
+0.7
growth on oleic acid
YNB Glucose
N.D.
+0.3
-0.3
-0.2
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
-0.0
+0.1
-0.0
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.2
+0.0
+0.1
-0.3
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.1
+0.0
+0.0
+0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.0
-0.1
-0.0
+0.1
auxotrophy
Dropout Complete
N.D.
+0.2
+0.1
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.0
-0.0
-0.2
+0.3
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.1
-0.2
+0.3
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.2
-0.1
+0.6
+0.2
growth on oleic acid
YNB Oleic Acid
N.D.
+0.3
-0.1
-0.1
+0.3
growth on ypd
YPD
N.D.
+0.0
+0.5
+0.7
-0.6
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.0
-0.3
+0.7
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.4
+0.4
-0.1
+0.5
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