Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8426 and 8427 are separated by 260 nucleotides8427 and 8428 are separated by 306 nucleotides8428 and 8429 are separated by 609 nucleotides8429 and 8430 are separated by 665 nucleotides mRNA_58: 8426 - HMMPfam-Arrestin (or S-antigen), N-terminal domain-PF00339,SUPERFAMILY--SSF81296, at 138,676 to 140,962 8426 mRNA_59: 8427 - Hypothetical Protein, at 141,223 to 142,116 8427 mRNA_60: 8428 - Hypothetical Protein, at 142,423 to 142,761 8428 mRNA_61: 8429 - SUPERFAMILY--SSF52047, at 143,371 to 144,965 8429 mRNA_62: 8430 - HMMPfam-HPP family-PF04982, at 145,631 to 146,829 8430
Group Condition mRNA_58 mRNA_59 mRNA_60 mRNA_61 mRNA_62
8426 8427 8428 8429 8430
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.8 -0.0 -1.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.3 -0.9 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.1 -0.8 -0.3 -0.0
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.3 -1.1 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.2 -0.9 +0.4 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 +0.0 +0.2 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.3 -0.8 +0.7 -0.0
auxotrophy YNB Glucose +0.0 +0.0 -0.5 -0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.0 +0.0 +0.0 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.0 +0.1 -0.3 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.1 -0.0 +0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.0 +0.1 -0.0 -0.2 +0.0
growth on oleic acid YNB Glucose +0.3 -0.3 -0.2 -0.1 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.0 -0.2 +0.3 +0.1
auxotrophy Dropout Complete +0.2 +0.1 -0.1 -0.2 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.2 +0.3 +0.0 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.1 +0.6 +0.2 -0.1
growth on oleic acid YNB Oleic Acid +0.3 -0.1 -0.1 +0.3 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 +0.4 -0.1 +0.5 -0.4
growth on ypd YPD +0.0 +0.5 +0.7 -0.6 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.3 +0.7 +0.4 +0.2
remove
mRNA_58
plot
remove
mRNA_59
plot
remove
mRNA_60
remove
mRNA_61
plot
remove
mRNA_62
plot