Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8428 and 8429 are separated by 609 nucleotides8429 and 8430 are separated by 665 nucleotides8430 and 8431 are separated by 251 nucleotides8431 and 8432 are separated by 373 nucleotides mRNA_60: 8428 - Hypothetical Protein, at 142,423 to 142,761 8428 mRNA_61: 8429 - SUPERFAMILY--SSF52047, at 143,371 to 144,965 8429 mRNA_62: 8430 - HMMPfam-HPP family-PF04982, at 145,631 to 146,829 8430 mRNA_63: 8431 - K01800 maiA, GSTZ1 maleylacetoacetate isomerase, at 147,081 to 148,199 8431 mRNA_64: 8432 - HMMPfam-Transcription initiation factor TFIID component TAF4 family-PF05236, at 148,573 to 150,625 8432
Group Condition mRNA_60 mRNA_61 mRNA_62 mRNA_63 mRNA_64
8428 8429 8430 8431 8432
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.9 +0.1 -0.3 +0.0 -1.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -1.1 -0.2 -0.3 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.8 -0.3 -0.0 +0.3 -0.8
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.3 -0.2 -0.3 -0.8
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.5 -0.4 +0.0 -0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 +0.7 -0.0 -0.0 -0.6
auxotrophy YNB Glucose 75mM Arginine -1.1 +0.2 -0.1 +0.0 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.1 +0.0 -0.5 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.0 -0.4 +0.0 -0.5
growth on ricinoleic acid YNB Glucose -0.0 -0.2 +0.0 -0.0 -0.5
growth on oleic acid YNB Oleic Acid -0.1 +0.3 -0.1 -0.3 +0.1
auxotrophy YNB Glucose -0.5 -0.1 +0.1 +0.0 +0.4
auxotrophy Dropout Complete -0.1 -0.2 +0.2 +0.2 -0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.6 +0.2 -0.1 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.9 +0.4 -0.3 +0.5 +0.5
growth on oleic acid YNB Glucose -0.2 -0.1 +0.3 +0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.3 +0.0 +0.1 +0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.1 -0.1 +0.4 +0.4
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.3 +0.1 +0.2 +0.4
growth on ypd YPD +0.7 -0.6 +0.1 +0.5 +0.7
facs on lipid accumulation Sorted No BODIPY Gate +0.7 +0.4 +0.2 +0.0 +0.1
remove
mRNA_60
plot
remove
mRNA_61
plot
remove
mRNA_62
remove
mRNA_63
plot
remove
mRNA_64
plot