Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8433 and 8434 are separated by 88 nucleotides8434 and 8435 are separated by 272 nucleotides8435 and 8436 are separated by 564 nucleotides8436 and 8437 are separated by 196 nucleotides mRNA_65: 8433 - K12882 NCBP1, CBP80 nuclear cap-binding protein subunit 1, at 150,773 to 154,577 8433 mRNA_66: 8434 - K15118 SLC25A38 solute carrier family 25, member 38, at 154,666 to 156,000 8434 mRNA_67: 8435 - K05864 PPID, CYPD peptidyl-prolyl isomerase D, at 156,273 to 158,120 8435 mRNA_68: 8436 - K12599 SKI2, SKIV2L antiviral helicase SKI2, at 158,685 to 163,751 8436 mRNA_69: 8437 - K03029 PSMD4, RPN10 26S proteasome regulatory subunit N10, at 163,948 to 165,826 8437
Group Condition mRNA_65 mRNA_66 mRNA_67 mRNA_68 mRNA_69
8433 8434 8435 8436 8437
facs on lipid accumulation Sorted Low BODIPY Gate -2.1 -0.8 -0.1 -0.9 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.7 +0.5 -0.0 +0.3 -1.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.7 -1.2 -0.0 -0.4 +0.6
facs on lipid accumulation Sorted High BODIPY Gate +0.4 -0.7 +0.1 -1.3 -0.3
growth on oleic acid YNB Glucose -0.4 -0.2 +0.1 -0.9 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.1 -0.5 +0.1 +0.0 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.1 +0.2 -0.9 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.2 -0.1 -0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.6 -0.1 -0.1 -1.1 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 +0.0 +0.1 -0.1 -0.2
growth on oleic acid YNB Oleic Acid -0.4 -0.2 +0.2 -0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine +1.1 -0.3 -0.3 -0.9 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.1 +0.0 -0.6 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 -0.5 -0.1 -0.3 +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.4 -0.1 +0.0 +0.0 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.2 -0.1 -0.1 +0.3
auxotrophy YNB Glucose +1.3 -0.1 -0.2 -0.7 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -1.3 +0.4 -0.2 +1.3 +0.1
auxotrophy Dropout Complete +1.4 -0.2 +0.1 -0.9 +0.1
growth on ricinoleic acid YNB Glucose +1.1 +0.5 -0.0 -0.7 -0.0
growth on ypd YPD -0.3 +0.4 +0.3 +0.6 -0.0
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