Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
8438 and 8439 are separated by 490 nucleotides
8439 and 8440 are separated by 214 nucleotides
8440 and 8441 are separated by 1008 nucleotides
8441 and 8442 are separated by 274 nucleotides
mRNA_70: 8438 - HMMPfam-Membrane-associating domain-PF01284, at 166,029 to 167,085
8438
mRNA_71: 8439 - HMMPfam-YABBY protein-PF04690,SUPERFAMILY--SSF47095, at 167,576 to 168,117
8439
mRNA_72: 8440 - BLAST apses-domain-containing protein [Moesziomyces ant..., at 168,332 to 168,818
8440
mRNA_73: 8441 - K00698 CHS1 chitin synthase, at 169,827 to 173,814
8441
mRNA_74: 8442 - KOG3600 Thyroid hormone receptor-associated protein complex, subunit TRAP240, at 174,089 to 180,350
8442
Group
Condition
mRNA
_70
mRNA
_71
mRNA
_72
mRNA
_73
mRNA
_74
8438
8439
8440
8441
8442
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
N.D.
-0.0
-0.1
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
+0.5
N.D.
-0.2
-0.2
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.6
N.D.
-0.1
+0.3
-1.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
N.D.
-0.1
-0.1
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.7
N.D.
-0.6
+0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.1
N.D.
+0.1
-0.1
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.5
N.D.
-0.1
+0.2
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
N.D.
+0.4
-0.1
-0.1
growth on ypd
YPD
-0.1
N.D.
+0.4
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.6
N.D.
+0.3
-0.5
-0.2
growth on oleic acid
YNB Glucose
+0.4
N.D.
+0.1
-0.2
+0.1
growth on ricinoleic acid
YNB Glucose
+0.8
N.D.
-0.5
+0.1
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.5
N.D.
+0.2
+0.1
-0.1
auxotrophy
Dropout Complete
+1.2
N.D.
-0.4
-0.1
-0.0
auxotrophy
YNB Glucose
+0.8
N.D.
-0.2
+0.3
-0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.9
N.D.
-0.2
+0.2
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.8
N.D.
-0.1
+0.1
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.8
N.D.
+0.4
-0.0
-0.1
growth on oleic acid
YNB Oleic Acid
+1.2
N.D.
-0.3
+0.0
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.8
N.D.
+0.3
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+1.2
N.D.
+0.4
+0.0
-0.1
remove
mRNA_70
plot
remove
mRNA_71
plot
remove
mRNA_72
remove
mRNA_73
plot
remove
mRNA_74
plot