Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8441 and 8442 are separated by 274 nucleotides8442 and 8443 are separated by 410 nucleotides8443 and 8444 are separated by 138 nucleotides8444 and 8445 are separated by 57 nucleotides mRNA_73: 8441 - K00698 CHS1 chitin synthase, at 169,827 to 173,814 8441 mRNA_74: 8442 - KOG3600 Thyroid hormone receptor-associated protein complex, subunit TRAP240, at 174,089 to 180,350 8442 mRNA_75: 8443 - K00606 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 180,761 to 182,108 8443 mRNA_76: 8444 - K18164 NDUFAF7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7, at 182,247 to 184,330 8444 mRNA_77: 8445 - K13121 FRA10AC1 protein FRA10AC1, at 184,388 to 185,510 8445
Group Condition mRNA_73 mRNA_74 mRNA_75 mRNA_76 mRNA_77
8441 8442 8443 8444 8445
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.4 -0.5 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.5 -0.1 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -1.0 +0.2 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.1 -0.2 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.5 -0.0 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.0 -0.0 N.D. N.D.
growth on ypd YPD -0.1 -0.0 +0.0 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.3 +0.3 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 -0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -0.2 +0.6 N.D. N.D.
growth on oleic acid YNB Glucose -0.2 +0.1 +0.1 N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.1 +0.1 +0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1 +0.4 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.2 +0.3 N.D. N.D.
auxotrophy Dropout Complete -0.1 -0.0 +0.4 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.0 +0.1 +0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.1 +0.6 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.1 +0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.1 +0.5 N.D. N.D.
auxotrophy YNB Glucose +0.3 -0.0 +0.5 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.1 +0.6 N.D. N.D.
remove
mRNA_73
plot
remove
mRNA_74
plot
remove
mRNA_75
remove
mRNA_76
plot
remove
mRNA_77
plot