Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
8441 and 8442 are separated by 274 nucleotides
8442 and 8443 are separated by 410 nucleotides
8443 and 8444 are separated by 138 nucleotides
8444 and 8445 are separated by 57 nucleotides
mRNA_73: 8441 - K00698 CHS1 chitin synthase, at 169,827 to 173,814
8441
mRNA_74: 8442 - KOG3600 Thyroid hormone receptor-associated protein complex, subunit TRAP240, at 174,089 to 180,350
8442
mRNA_75: 8443 - K00606 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 180,761 to 182,108
8443
mRNA_76: 8444 - K18164 NDUFAF7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7, at 182,247 to 184,330
8444
mRNA_77: 8445 - K13121 FRA10AC1 protein FRA10AC1, at 184,388 to 185,510
8445
Group
Condition
mRNA
_73
mRNA
_74
mRNA
_75
mRNA
_76
mRNA
_77
8441
8442
8443
8444
8445
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.4
-0.5
N.D.
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.5
-0.1
N.D.
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
-1.0
+0.2
N.D.
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.1
-0.2
N.D.
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.5
-0.0
N.D.
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.0
-0.0
N.D.
N.D.
growth on ypd
YPD
-0.1
-0.0
+0.0
N.D.
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.3
+0.3
N.D.
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.1
-0.0
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
-0.2
+0.6
N.D.
N.D.
growth on oleic acid
YNB Glucose
-0.2
+0.1
+0.1
N.D.
N.D.
growth on ricinoleic acid
YNB Glucose
+0.1
+0.1
+0.0
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.1
+0.4
N.D.
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.2
+0.3
N.D.
N.D.
auxotrophy
Dropout Complete
-0.1
-0.0
+0.4
N.D.
N.D.
growth on oleic acid
YNB Oleic Acid
+0.0
+0.1
+0.3
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
-0.1
+0.6
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.1
+0.3
N.D.
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
-0.1
+0.5
N.D.
N.D.
auxotrophy
YNB Glucose
+0.3
-0.0
+0.5
N.D.
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.2
-0.1
+0.6
N.D.
N.D.
remove
mRNA_73
plot
remove
mRNA_74
plot
remove
mRNA_75
remove
mRNA_76
plot
remove
mRNA_77
plot