Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8442 and 8443 are separated by 410 nucleotides8443 and 8444 are separated by 138 nucleotides8444 and 8445 are separated by 57 nucleotides8445 and 8446 are separated by 112 nucleotides mRNA_74: 8442 - KOG3600 Thyroid hormone receptor-associated protein complex, subunit TRAP240, at 174,089 to 180,350 8442 mRNA_75: 8443 - K00606 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 180,761 to 182,108 8443 mRNA_76: 8444 - K18164 NDUFAF7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7, at 182,247 to 184,330 8444 mRNA_77: 8445 - K13121 FRA10AC1 protein FRA10AC1, at 184,388 to 185,510 8445 mRNA_78: 8446 - HMMPfam-NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4)-PF07225, at 185,623 to 186,207 8446
Group Condition mRNA_74 mRNA_75 mRNA_76 mRNA_77 mRNA_78
8442 8443 8444 8445 8446
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.5 N.D. N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -1.0 +0.2 N.D. N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.5 -0.1 N.D. N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.0 N.D. N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.2 N.D. N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 N.D. N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.0 N.D. N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.3 N.D. N.D. N.D.
growth on ypd YPD -0.0 +0.0 N.D. N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.1 +0.0 N.D. N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.3 N.D. N.D. N.D.
growth on oleic acid YNB Glucose +0.1 +0.1 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.4 N.D. N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.1 +0.3 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.5 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.3 N.D. N.D. N.D.
auxotrophy Dropout Complete -0.0 +0.4 N.D. N.D. N.D.
auxotrophy YNB Glucose -0.0 +0.5 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.6 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.6 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.6 N.D. N.D. N.D.
remove
mRNA_74
plot		 remove
mRNA_75
plot		 remove
mRNA_76		 remove
mRNA_77
plot		 remove
mRNA_78
plot